iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114053

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G056600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g004770	Sb09g004770.1	Sb09g004770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-07	30.8	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +++dg   ++lp C Hvfh +C+  w         + +CP+Cr
   Q: 128  CAVCLGEMEDGelGRLLPaCCHVFHVECIDTW------LGVSSTCPVCR 170
           ********99877667889*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAMSLGRYDA NVLLAAVTAL SAAVAFVAAL HLYARCLLLQ RRRRVALAEA EGSSSPRVVV 60
LQQRHRPPDG YVVEVVEGAG ACGQQAAGLD AKALRALPVF TWESSEQGKG KGKEEGGGGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCATGT CGCTGGGTCG CTACGACGCC AACGTCCTGC TGGCCGCGGT GACCGCGCTC 60
TCGGCGGCGG TCGCCTTCGT CGCGGCGCTC CACCTCTACG CGCGCTGCCT CCTGCTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g004770

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001011	Aegilops tauschii	52.50	2.00e-25	107.00
IUUC-Hvu-047483	Hordeum vulgare	78.57	9.00e-17	77.00
IUUC-Oba-075892	Oryza barthii	58.82	6.00e-26	110.00
IUUC-Obr-076025	Oryza brachyantha	62.39	8.00e-26	108.00
IUUC-Ogl-077073	Oryza glaberrima	58.18	1.00e-27	114.00
IUUC-Oin-080037	Oryza indica	59.09	6.00e-24	102.00
IUUC-Ome-081684	Oryza meridionalis	64.36	8.00e-25	105.00
IUUC-Oni-082617	Oryza nivara	57.27	2.00e-24	103.00
IUUC-Opu-083747	Oryza punctata	61.47	4.00e-28	116.00
IUUC-Oru-084512	Oryza rufipogon	59.09	2.00e-25	107.00
IUUC-Osa-085628	Oryza sativa	59.09	2.00e-25	107.00
IUUC-Sit-109893	Setaria italica	64.50	2.00e-28	117.00
IUUC-Tae-123345	Triticum aestivum	53.39	2.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence