iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080633

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539084.1_FG004	KN539084.1_FGT004	KN539084.1_FGP004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.70e-68	231.2	42	235

Domain Profile

DUB/USP

   S: 132  ekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenk.yycekckkkqeaekklk 222
           e++   +ksl++++F+g+l+sq+kc +c + s++++pfldlsl++ + +     sl  +L++ft+ee l+g +k y+c++c+kk+ a+kk++
   Q: 42   ESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKAT-----SLVRALQNFTAEELLDGGEKqYQCQRCRKKVVAKKKFT 128
           56677789****************************************9.....9**************986655***************** PP
   S: 223  lkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDsk 313
           ++k P vL++hLkRf  s   + reki+kkv+f  +Ldl+pf ++++ +   + kY+L++v+vH G +++sGHY+++v+ ++g W ++dD++
   Q: 129  IDKAPYVLTIHLKRF--SPF-NPREKIDKKVDFQPMLDLKPFISDSKGA---DFKYSLYGVLVHAGwNTQSGHYYCFVRTSSGMWHNLDDNQ 214
           ***************..554.6789*******************96655...8*************************************** PP
   S: 314  VtevkeeevleetgstaYvlfYkr 337
           V++v+e++vl+   ++aY+lfY r
   Q: 215  VRQVREADVLR---QKAYMLFYVR 235
           ***********...********87 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

GAGLQNLGNT CYLNSVLQCL TYTEPFAAYL QSGKHKSSLP SESPSAYEKS LVHKIFGGRL 60
RSQVKCTQCS HCSNKFDPFL DLSLDIGKAT SLVRALQNFT AEELLDGGEK QYQCQRCRKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGCTGGCC TGCAAAATCT TGGGAACACT TGCTACCTGA ACTCGGTGCT GCAATGCTTG 60
ACGTACACAG AACCATTCGC GGCCTATTTG CAGAGCGGGA AGCACAAGTC TTCATGTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000845	Aegilops tauschii	56.80	0.00e+00	731.00
IUUC-Bdi-014036	Brachypodium distachyon	59.68	0.00e+00	752.00
IUUC-Lpe-051574	Leersia perrieri	73.72	0.00e+00	1192.00
IUUC-Oba-075866	Oryza barthii	97.96	0.00e+00	1442.00
IUUC-Obr-076408	Oryza brachyantha	75.23	0.00e+00	1092.00
IUUC-Ogl-077239	Oryza glaberrima	98.10	0.00e+00	1446.00
IUUC-Ogu-078064	Oryza glumaepatula	97.83	0.00e+00	1460.00
IUUC-Oin-079157	Oryza indica	97.42	0.00e+00	1437.00
IUUC-Ome-081746	Oryza meridionalis	97.28	0.00e+00	1437.00
IUUC-Oni-082339	Oryza nivara	97.55	0.00e+00	1439.00
IUUC-Opu-083194	Oryza punctata	89.81	0.00e+00	1293.00
IUUC-Oru-085083	Oryza rufipogon	97.69	0.00e+00	1438.00
IUUC-Osa-086180	Oryza sativa	97.55	0.00e+00	1439.00
IUUC-Sit-109895	Setaria italica	53.45	0.00e+00	750.00
IUUC-Sbi-114477	Sorghum bicolor	57.03	0.00e+00	753.00
IUUC-Tae-122827	Triticum aestivum	60.79	0.00e+00	786.00
IUUC-Tur-126861	Triticum urartu	54.64	0.00e+00	783.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence