iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050770

Ensembl Protein ID

LPERR06G06390.1

UniProt Accession

A0A0D9WN58; A0A0D9WN58_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G06390	LPERR06G06390.1	LPERR06G06390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.1	187	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e+f   +d  + lpC+H++h dC+ +w       + + +CP+Cr
   Q: 187  CPVCKEEFevgED-ARELPCKHAYHSDCIVRW------LRLHNSCPVCR 228
           ********99766.999***************......**********8 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSTGANGGGG GVLRRRRWNL YWCYVCRRAL RVVVPSSTSD VYCPRCFGRF LHEIDLPVPR 60
VRAPPTDQFF QPPFLPYEGP RRWILHAGND DDVTDGISRR RRFPSPPPAP VTRRWPEGDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGACGG GGGCAAACGG CGGCGGCGGC GGCGTGCTGC GGCGGCGGAG GTGGAACCTG 60
TACTGGTGCT ACGTGTGCCG CCGCGCGCTG CGTGTGGTCG TCCCGTCGTC AACCTCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005575	Arabidopsis lyrata	39.61	7.00e-36	143.00
IUUC-Ath-007502	Arabidopsis thaliana	38.52	1.00e-33	135.00
IUUC-Bdi-014563	Brachypodium distachyon	62.56	3.00e-63	234.00
IUUC-Hvu-047520	Hordeum vulgare	51.42	6.00e-70	256.00
IUUC-Obr-076918	Oryza brachyantha	70.67	3.00e-41	160.00
IUUC-Ogl-077621	Oryza glaberrima	69.47	3.00e-98	350.00
IUUC-Ogu-078542	Oryza glumaepatula	69.78	2.00e-100	358.00
IUUC-Oin-079595	Oryza indica	70.13	5.00e-92	331.00
IUUC-Ome-081492	Oryza meridionalis	70.13	1.00e-101	362.00
IUUC-Oni-082188	Oryza nivara	67.08	6.00e-93	335.00
IUUC-Opu-083593	Oryza punctata	71.25	1.00e-96	345.00
IUUC-Oru-084571	Oryza rufipogon	68.22	6.00e-104	369.00
IUUC-Pgr-103273	Puccinia graminis	39.82	2.00e-16	79.00
IUUC-Sit-110480	Setaria italica	54.68	1.00e-70	259.00
IUUC-Tae-125930	Triticum aestivum	56.96	4.00e-58	217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence