iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057851

Ensembl Protein ID

KEH38738

UniProt Accession

A0A072VBB9; A0A072VBB9_MEDTR

Genbank Protein ID

KEH38738.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g079320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g079320	KEH38738	KEH38738

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-09	37.1	159	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCledf++g    ++  p C+H+fh dC+ +w       +++ +CP+Cr
   Q: 159  CAICLEDFQRGqlcqVF--PvCKHIFHSDCIDHW------LQRKLTCPICR 201
           ********998543322..25*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAELTEVFPT GKQFDGLMHM YVYVIKFDLP TFVMICLIIT MFFFIFHQIF HGLFYWFVEM 60
RPIIINEHDI EQGTHIAYDD DDDEDHNDVS HQGVTIFHAL VFSNLQDWTM VATSEEEQEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGT TGACAGAAGT TTTTCCCACA GGCAAACAAT TTGATGGTTT AATGCACATG 60
TATGTTTATG TCATAAAATT TGATCTTCCA ACATTTGTCA TGATATGTCT TATAATCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g079320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000644	Aegilops tauschii	41.46	7.00e-15	72.40
IUUC-Aly-006007	Arabidopsis lyrata	44.71	3.00e-14	70.90
IUUC-Bol-015825	Brassica oleracea	37.61	2.00e-15	74.70
IUUC-Bra-016968	Brassica rapa	35.78	3.00e-15	73.90
IUUC-Gma-044282	Glycine max	60.49	9.00e-61	225.00
IUUC-Oba-075458	Oryza barthii	56.82	4.00e-13	66.60
IUUC-Ogl-077126	Oryza glaberrima	56.82	1.00e-13	68.60
IUUC-Ogu-078016	Oryza glumaepatula	55.32	2.00e-13	69.30
IUUC-Oru-084890	Oryza rufipogon	56.82	1.00e-13	68.90
IUUC-Pop-098869	Populus trichocarpa	58.70	3.00e-13	67.00
IUUC-Ppe-101753	Prunus persica	54.22	7.00e-25	104.00
IUUC-Tca-121263	Theobroma cacao	37.84	1.00e-16	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence