iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006797

Ensembl Protein ID

AT4G11270.1

UniProt Accession

Q9SUT4; Q9SUT4_ARATH

Genbank Protein ID

AEE82991.1; ANM67741.1; CAB51411.1; CAB81228.1

Protein Name

Putative uncharacterized protein AT4g11270; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CP002687; CP002687; AL096882; AL161531

Gene Name

At4g11270; F8L21.60; F8L21_60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G11270	AT4G11270.1	AT4G11270.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-07	32.1	526	571

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+sv cla           ++ + l+sGs D+ti++WDl +g++
   Q: 526  GHTGSVLCLAAhrmfgdangcNSsHVLISGSMDCTIRIWDLESGNV 571
           8*******9655777***99855588***************99976 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKCRSVACLW SRAPPSHRVT ATASLTNPPT LYTGGSDGSI IWWSISSSSE SNSVTRLPHH 60
EIKPIAMLCG HTSPIVDLAI CDPTILSSNG VVASDNGNAD PFVNCCALIS ACTDGVLCVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAAGTTG ATAATAATCT AGTAAAGTTA AAATATCAAT TATCAAACTT TTGCCAAATA 60
TTTACCTTAA AAAATTTATT TGCAACCTCG AAAAATCCAT CTAAATATGT ACAGATATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	36.02	3.00e-117	415.00
IUUC-Aml-001481	Ailuropoda melanoleuca	21.53	2.00e-09	58.20
IUUC-Atr-002981	Amborella trichopoda	44.58	0.00e+00	1136.00
IUUC-Apl-003943	Anas platyrhynchos	21.38	1.00e-09	58.50
IUUC-Aly-005882	Arabidopsis lyrata	91.56	0.00e+00	2573.00
IUUC-Bta-012912	Bos taurus	22.04	5.00e-10	60.10
IUUC-Bol-016538	Brassica oleracea	82.88	0.00e+00	2177.00
IUUC-Bra-018098	Brassica rapa	79.94	0.00e+00	1394.00
IUUC-Cja-019970	Callithrix jacchus	21.53	3.00e-09	57.80
IUUC-Cfa-020677	Canis familiaris	21.53	2.00e-09	58.20
IUUC-Cpo-021408	Cavia porcellus	21.53	1.00e-09	58.50
IUUC-Csa-023786	Chlorocebus sabaeus	21.53	2.00e-09	58.20
IUUC-Cho-024612	Choloepus hoffmanni	21.53	2.00e-09	58.20
IUUC-Cin-025255	Ciona intestinalis	26.09	3.00e-09	57.80
IUUC-Csv-026361	Ciona savignyi	21.34	2.00e-10	61.20
IUUC-Cne-026981	Cryptococcus neoformans	21.64	2.00e-15	78.20
IUUC-Dno-029072	Dasypus novemcinctus	21.53	2.00e-09	58.20
IUUC-Dme-031768	Drosophila melanogaster	32.08	2.00e-09	58.20
IUUC-Eca-033496	Equus caballus	21.53	3.00e-09	57.80
IUUC-Gga-041043	Gallus gallus	21.29	1.00e-09	58.90
IUUC-Gma-043201	Glycine max	52.34	0.00e+00	1355.00
IUUC-Ggo-045112	Gorilla gorilla	21.53	3.00e-09	57.80
IUUC-Hsa-046732	Homo sapiens	21.53	2.00e-09	58.20
IUUC-Lch-049569	Latimeria chalumnae	27.82	2.00e-10	61.20
IUUC-Lpe-051544	Leersia perrieri	44.58	0.00e+00	1003.00
IUUC-Laf-054349	Loxodonta africana	21.29	9.00e-10	59.30
IUUC-Mcc-055800	Macaca mulatta	21.53	2.00e-09	58.20
IUUC-Mtr-058676	Medicago truncatula	52.98	0.00e+00	1404.00
IUUC-Mmr-061271	Microcebus murinus	21.53	2.00e-09	58.20
IUUC-Mac-065659	Musa acuminata	45.93	0.00e+00	1021.00
IUUC-Nle-069610	Nomascus leucogenys	21.53	2.00e-09	58.20
IUUC-Oan-073095	Ornithorhynchus anatinus	22.25	9.00e-10	59.30
IUUC-Oba-075713	Oryza barthii	45.58	0.00e+00	991.00
IUUC-Obr-076894	Oryza brachyantha	43.74	0.00e+00	989.00
IUUC-Ogl-077521	Oryza glaberrima	45.67	0.00e+00	996.00
IUUC-Ogu-078103	Oryza glumaepatula	44.27	0.00e+00	1007.00
IUUC-Oin-080169	Oryza indica	45.43	0.00e+00	996.00
IUUC-Olo-080818	Oryza longistaminata	54.58	4.00e-149	521.00
IUUC-Ome-081902	Oryza meridionalis	44.57	0.00e+00	1018.00
IUUC-Oni-082333	Oryza nivara	45.30	0.00e+00	995.00
IUUC-Opu-083952	Oryza punctata	46.07	0.00e+00	1009.00
IUUC-Oru-085112	Oryza rufipogon	45.35	0.00e+00	991.00
IUUC-Osa-085615	Oryza sativa	41.18	2.00e-137	482.00
IUUC-Olu-087828	Ostreococcus lucimarinus	30.33	6.00e-22	99.40
IUUC-Oar-089575	Ovis aries	21.90	1.00e-10	62.00
IUUC-Ptr-091041	Pan troglodytes	21.53	2.00e-09	58.20
IUUC-Pan-092048	Papio anubis	21.53	3.00e-09	57.80
IUUC-Pma-094117	Petromyzon marinus	33.70	4.00e-06	45.80
IUUC-Pab-098194	Pongo abelii	21.53	3.00e-09	57.80
IUUC-Pop-099546	Populus trichocarpa	54.47	0.00e+00	1543.00
IUUC-Ppe-101653	Prunus persica	55.56	0.00e+00	1512.00
IUUC-Pva-102803	Pteropus vampyrus	21.90	9.00e-10	59.30
IUUC-Sha-106926	Sarcophilus harrisii	22.04	2.00e-09	58.20
IUUC-Smo-108766	Selaginella moellendorffii	30.70	3.00e-162	565.00
IUUC-Sit-110049	Setaria italica	36.56	9.00e-132	464.00
IUUC-Sly-111516	Solanum lycopersicum	47.82	0.00e+00	1193.00
IUUC-Stu-111982	Solanum tuberosum	48.77	0.00e+00	1243.00
IUUC-Sar-113730	Sorex araneus	21.44	6.00e-09	56.60
IUUC-Sbi-114887	Sorghum bicolor	32.00	4.00e-106	378.00
IUUC-Ssc-116213	Sus scrofa	21.53	2.00e-09	57.80
IUUC-Tsy-118970	Tarsius syrichta	21.72	2.00e-09	57.80
IUUC-Tca-121391	Theobroma cacao	53.66	0.00e+00	1386.00
IUUC-Tae-123628	Triticum aestivum	43.93	0.00e+00	996.00
IUUC-Tur-125959	Triticum urartu	37.77	3.00e-128	452.00
IUUC-Vpa-130178	Vicugna pacos	20.67	2.00e-09	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence