iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114290

Ensembl Protein ID

Sb10g023300.1

UniProt Accession

C5Z5K3; C5Z5K3_SORBI

Genbank Protein ID

EER90002.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G181600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g023300	Sb10g023300.1	Sb10g023300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-29	99.5	268	299
UBD/Beta-Prp	8.00e-46	157.4	28	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gH ++v+c++f ++   + +sGs Dgti++W l
   Q: 268  GHHGPVHCVRFaPGgeSY-ASGSEDGTIRIWQL 299
           899*********665567.************86 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGsh 114
           +pd+ +l+++s+d    + + +tg+ + +++gh+++v+++++++++   +++s D  +kvwd  tg+ +h+++ h++ v++++fs++++ l++G+ 
   Q: 28   TPDGYFLISASKDTNPMLRNGETGDWIGTFQGHKGAVWSCCLDRNALRAASASADFSAKVWDALTGDELHSFE-HKHIVRACAFSEDTHLLLTGGM 122
           89999999***99999999***************************9**************************.********************** PP
   S: 115  drtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
            +t+rv+d++        l++  g+v+++++  ++  +l s+++ + vrlWd++tgk+++tl+   + sv+s +++++g ++++ ++ ++vk+wd 
   Q: 123  EKTLRVYDMNRPDAAPRELDKSPGSVRTAAWLHSDqTILSSCTDMGGVRLWDVRTGKIVQTLET--KASVTSAEVSQDG-RFITTADGSSVKFWDA 215
           ***********99999999999999999998777747777777779****************75..***********98.88899999*******8 PP
   S: 210  qt 211
            +
   Q: 216  NH 217
           75 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEKKKVAIPL VCHGHSRPVV DLFYSPVTPD GYFLISASKD TNPMLRNGET GDWIGTFQGH 60
KGAVWSCCLD RNALRAASAS ADFSAKVWDA LTGDELHSFE HKHIVRACAF SEDTHLLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCACCCTT CGCCCAAGGA GGCCGGCCTC GCCTCACACA GTCACGCCCC CGCCCGCCCC 60
CGCCCGCCGA TCCATCCACC CAATAAAGCG CCTGTACAGA TCCAACCCTA AGGATCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_10g023300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	87.46	3.00e-172	596.00
IUUC-Aml-002091	Ailuropoda melanoleuca	49.34	8.00e-77	279.00
IUUC-Apl-003327	Anas platyrhynchos	48.46	1.00e-64	238.00
IUUC-Aca-005324	Anolis carolinensis	50.34	8.00e-78	282.00
IUUC-Ame-011328	Astyanax mexicanus	53.08	9.00e-80	289.00
IUUC-Bta-013429	Bos taurus	51.72	1.00e-79	288.00
IUUC-Cja-018740	Callithrix jacchus	49.17	3.00e-76	277.00
IUUC-Cfa-021145	Canis familiaris	51.72	8.00e-80	289.00
IUUC-Cpo-022373	Cavia porcellus	51.72	1.00e-80	292.00
IUUC-Csa-023098	Chlorocebus sabaeus	51.72	2.00e-79	288.00
IUUC-Cho-024856	Choloepus hoffmanni	45.86	5.00e-63	233.00
IUUC-Dre-028457	Danio rerio	52.76	1.00e-82	298.00
IUUC-Dno-029213	Dasypus novemcinctus	51.72	5.00e-80	290.00
IUUC-Ete-032558	Echinops telfairi	43.14	3.00e-49	187.00
IUUC-Eca-033934	Equus caballus	51.72	9.00e-80	289.00
IUUC-Eeu-034650	Erinaceus europaeus	42.41	3.00e-63	234.00
IUUC-Fca-035909	Felis catus	51.72	2.00e-78	285.00
IUUC-Fal-036706	Ficedula albicollis	47.62	5.00e-65	240.00
IUUC-Gmo-039707	Gadus morhua	50.69	1.00e-77	281.00
IUUC-Gga-040901	Gallus gallus	51.38	9.00e-79	286.00
IUUC-Gac-041876	Gasterosteus aculeatus	50.34	1.00e-75	275.00
IUUC-Ggo-044583	Gorilla gorilla	50.52	6.00e-75	273.00
IUUC-Hsa-046553	Homo sapiens	49.50	9.00e-77	279.00
IUUC-Hvu-047544	Hordeum vulgare	87.02	1.00e-174	604.00
IUUC-Itr-047980	Ictidomys tridecemlineatus	51.72	6.00e-80	290.00
IUUC-Lch-050078	Latimeria chalumnae	52.92	2.00e-81	294.00
IUUC-Lpe-051246	Leersia perrieri	91.25	0.00e+00	634.00
IUUC-Loc-052598	Lepisosteus oculatus	52.07	1.00e-80	292.00
IUUC-Laf-054053	Loxodonta africana	51.03	3.00e-79	287.00
IUUC-Mcc-054652	Macaca mulatta	49.34	1.00e-76	279.00
IUUC-Mga-059664	Meleagris gallopavo	51.20	1.00e-77	281.00
IUUC-Mmr-061044	Microcebus murinus	51.72	8.00e-80	289.00
IUUC-Mdo-063019	Monodelphis domestica	51.03	5.00e-78	283.00
IUUC-Mmu-064092	Mus musculus	51.72	1.00e-79	288.00
IUUC-Mpu-066557	Mustela putorius furo	51.72	6.00e-80	290.00
IUUC-Mlu-068179	Myotis lucifugus	51.72	3.00e-80	291.00
IUUC-Nle-069482	Nomascus leucogenys	49.17	4.00e-76	277.00
IUUC-Opr-071055	Ochotona princeps	40.00	4.00e-49	187.00
IUUC-Ont-072663	Oreochromis niloticus	49.50	4.00e-72	263.00
IUUC-Ocu-074942	Oryctolagus cuniculus	51.72	9.00e-80	289.00
IUUC-Oba-075160	Oryza barthii	92.51	0.00e+00	633.00
IUUC-Obr-076864	Oryza brachyantha	89.83	1.00e-179	620.00
IUUC-Ogl-077076	Oryza glaberrima	92.51	0.00e+00	633.00
IUUC-Ogu-078591	Oryza glumaepatula	92.51	0.00e+00	633.00
IUUC-Olo-080389	Oryza longistaminata	91.57	1.00e-137	481.00
IUUC-Ome-081858	Oryza meridionalis	83.92	9.00e-178	615.00
IUUC-Oni-082190	Oryza nivara	91.92	0.00e+00	630.00
IUUC-Opu-084163	Oryza punctata	91.45	0.00e+00	637.00
IUUC-Oru-084730	Oryza rufipogon	92.51	0.00e+00	633.00
IUUC-Osa-086010	Oryza sativa	91.45	0.00e+00	635.00
IUUC-Ola-086704	Oryzias latipes	51.38	1.00e-78	285.00
IUUC-Oga-088932	Otolemur garnettii	44.40	1.00e-51	196.00
IUUC-Oar-090398	Ovis aries	51.72	9.00e-80	289.00
IUUC-Ptr-091202	Pan troglodytes	51.72	1.00e-79	288.00
IUUC-Pan-091948	Papio anubis	51.72	1.00e-79	288.00
IUUC-Psi-093863	Pelodiscus sinensis	48.50	9.00e-67	246.00
IUUC-Pma-094255	Petromyzon marinus	50.69	2.00e-76	278.00
IUUC-Pfo-096438	Poecilia formosa	52.76	8.00e-82	296.00
IUUC-Pab-097994	Pongo abelii	51.72	1.00e-79	288.00
IUUC-Pca-100761	Procavia capensis	47.59	1.00e-69	255.00
IUUC-Pva-102794	Pteropus vampyrus	47.93	5.00e-70	256.00
IUUC-Rno-105712	Rattus norvegicus	51.72	1.00e-79	289.00
IUUC-Sha-107568	Sarcophilus harrisii	51.03	7.00e-78	283.00
IUUC-Sit-109807	Setaria italica	96.17	0.00e+00	660.00
IUUC-Sar-113491	Sorex araneus	44.62	4.00e-43	166.00
IUUC-Ssc-116392	Sus scrofa	49.17	5.00e-76	276.00
IUUC-Tgu-116835	Taeniopygia guttata	48.46	6.00e-64	236.00
IUUC-Tru-117558	Takifugu rubripes	52.76	2.00e-80	291.00
IUUC-Tsy-119522	Tarsius syrichta	50.00	3.00e-72	264.00
IUUC-Tni-120330	Tetraodon nigroviridis	52.92	5.00e-78	283.00
IUUC-Tre-122163	Trichoderma reesei	37.58	1.00e-47	182.00
IUUC-Tbe-127324	Tupaia belangeri	36.02	1.00e-24	106.00
IUUC-Ttr-128202	Tursiops truncatus	51.72	2.00e-79	288.00
IUUC-Vpa-130382	Vicugna pacos	51.72	8.00e-80	289.00
IUUC-Xtr-132648	Xenopus tropicalis	48.97	6.00e-72	263.00
IUUC-Xma-133969	Xiphophorus maculatus	48.97	2.00e-72	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence