iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-080081

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

CM000130

Gene Name

OsI_20111

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA019934	BGIOSGA019934-TA	BGIOSGA019934-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	6.90e-30	103.9	28	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           +p++f+CpIsle+Mr Pv lp+G tydr+sI++wl++g++tcP tr pl+++dlvPnl lrrli+ + 
   Q: 28   TPAAFRCPISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPNLLLRRLIHLHA 95
           799*************************************************************9765 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MDAAVAGQHA RRRIRPPEPL VMAGSPSTPA AFRCPISLEV MRSPVSLPTG ATYDRASIQR 60
WLDTGHRTCP ATRLPLASTD LVPNLLLRRL IHLHAATLPP SPSPEVVLSQ LAAAGGEPAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGG CGGTCGCCGG GCAGCACGCG AGGCGGCGGA TCCGGCCGCC GGAGCCGCTG 60
GTGATGGCCG GGTCGCCGTC GACGCCCGCC GCCTTCCGGT GCCCGATCTC GCTGGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014027	Brachypodium distachyon	86.18	4.00e-156	543.00
IUUC-Hvu-047473	Hordeum vulgare	88.06	6.00e-126	442.00
IUUC-Lpe-050922	Leersia perrieri	93.65	1.00e-175	608.00
IUUC-Obr-076531	Oryza brachyantha	93.58	6.00e-171	592.00
IUUC-Ogl-077245	Oryza glaberrima	100.00	0.00e+00	652.00
IUUC-Ogu-078694	Oryza glumaepatula	99.56	0.00e+00	659.00
IUUC-Ome-082012	Oryza meridionalis	98.01	0.00e+00	642.00
IUUC-Oni-082945	Oryza nivara	99.78	0.00e+00	649.00
IUUC-Opu-083991	Oryza punctata	98.89	0.00e+00	640.00
IUUC-Oru-084867	Oryza rufipogon	99.78	0.00e+00	649.00
IUUC-Osa-085302	Oryza sativa	99.78	0.00e+00	649.00
IUUC-Sit-110215	Setaria italica	88.50	2.00e-153	534.00
IUUC-Sbi-113847	Sorghum bicolor	70.52	5.00e-111	393.00
IUUC-Tae-123902	Triticum aestivum	88.08	0.00e+00	628.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence