iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110988

Ensembl Protein ID

Solyc02g038750.2.1

UniProt Accession

K4B5W8; K4B5W8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g038750.2	Solyc02g038750.2.1	Solyc02g038750.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-17	61.5	268	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           +v  laf +d ++l s+s+D+ +k+WDl + v+
   Q: 268  PVERLAFsHDrKYLGSASHDHLLKLWDLNELVQ 300
           577899*9899****************977665 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAAVEIDLGK LPFDIDFHPS DHLVAAGLIT GDLLLYRYNA DSPAQKLLEV KAHSESCRTV 60
RIINEGRAIV TGSPDCSILA TDIETGSEIV RLENSHGAAV NRIVNLTESS IASGDDEGCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATTGT TTTCTCCTGT CCAAACAAGT CCCTGAAATT AGGGTTTAAG AGCAAAGACG 60
TGAAAAATCC TACACTAGCC TAAGCCTAAA CCCTTGTCAG GGAAGTATGG CTGCCGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009855--P:determination of bilateral symmetry
GO:0080186--P:developmental vegetative growth
GO:0009793--P:embryo development ending in seed dormancy
GO:0009960--P:endosperm development
GO:0010197--P:polar nucleus fusion
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

sly:101265597

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	52.20	5.00e-98	350.00
IUUC-Aml-001768	Ailuropoda melanoleuca	38.16	6.00e-56	211.00
IUUC-Atr-002764	Amborella trichopoda	57.14	7.00e-52	195.00
IUUC-Apl-003880	Anas platyrhynchos	35.66	3.00e-44	172.00
IUUC-Aca-005060	Anolis carolinensis	38.25	4.00e-55	209.00
IUUC-Aly-006484	Arabidopsis lyrata	64.43	6.00e-114	402.00
IUUC-Ath-006652	Arabidopsis thaliana	69.77	2.00e-132	464.00
IUUC-Bta-013497	Bos taurus	38.87	6.00e-57	213.00
IUUC-Bdi-014378	Brachypodium distachyon	61.11	2.00e-107	381.00
IUUC-Bol-016352	Brassica oleracea	70.57	6.00e-131	459.00
IUUC-Bra-017103	Brassica rapa	69.70	9.00e-129	452.00
IUUC-Cja-018792	Callithrix jacchus	37.46	1.00e-55	209.00
IUUC-Cfa-020739	Canis familiaris	37.46	6.00e-56	211.00
IUUC-Cpo-022331	Cavia porcellus	37.46	7.00e-56	210.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	47.09	6.00e-46	176.00
IUUC-Csa-023414	Chlorocebus sabaeus	37.10	7.00e-56	210.00
IUUC-Cho-024600	Choloepus hoffmanni	36.40	3.00e-51	194.00
IUUC-Cin-025565	Ciona intestinalis	32.64	4.00e-44	171.00
IUUC-Csv-026294	Ciona savignyi	33.56	4.00e-44	171.00
IUUC-Cne-026979	Cryptococcus neoformans	36.05	2.00e-47	182.00
IUUC-Cme-027192	Cyanidioschyzon merolae	30.69	1.00e-21	96.70
IUUC-Dre-028492	Danio rerio	35.91	1.00e-49	189.00
IUUC-Dno-030050	Dasypus novemcinctus	36.36	1.00e-49	191.00
IUUC-Dor-030386	Dipodomys ordii	31.80	4.00e-40	157.00
IUUC-Dme-032012	Drosophila melanogaster	32.53	7.00e-40	157.00
IUUC-Ete-032491	Echinops telfairi	37.81	5.00e-56	210.00
IUUC-Eca-033583	Equus caballus	38.52	1.00e-56	214.00
IUUC-Eeu-034976	Erinaceus europaeus	39.02	6.00e-50	190.00
IUUC-Fca-036417	Felis catus	38.25	1.00e-56	212.00
IUUC-Gmo-039505	Gadus morhua	33.56	1.00e-51	196.00
IUUC-Gga-040732	Gallus gallus	35.79	1.00e-50	192.00
IUUC-Gac-041313	Gasterosteus aculeatus	34.24	5.00e-52	197.00
IUUC-Gma-044122	Glycine max	73.62	8.00e-140	488.00
IUUC-Ggo-044748	Gorilla gorilla	37.46	5.00e-56	210.00
IUUC-Hsa-046943	Homo sapiens	37.10	2.00e-55	208.00
IUUC-Hvu-047659	Hordeum vulgare	57.59	6.00e-109	386.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	36.84	1.00e-55	209.00
IUUC-Lch-050331	Latimeria chalumnae	34.02	8.00e-42	163.00
IUUC-Lpe-051193	Leersia perrieri	63.89	1.00e-112	399.00
IUUC-Loc-051946	Lepisosteus oculatus	36.36	4.00e-55	208.00
IUUC-Laf-054035	Loxodonta africana	37.89	4.00e-57	214.00
IUUC-Mcc-055285	Macaca mulatta	40.62	4.00e-26	110.00
IUUC-Meu-056596	Macropus eugenii	36.40	2.00e-54	205.00
IUUC-Mtr-058637	Medicago truncatula	73.68	2.00e-136	478.00
IUUC-Mga-059839	Meleagris gallopavo	39.27	7.00e-37	148.00
IUUC-Mdo-062868	Monodelphis domestica	36.40	4.00e-54	205.00
IUUC-Mmu-064305	Mus musculus	37.46	2.00e-55	208.00
IUUC-Mac-065041	Musa acuminata	67.14	3.00e-134	470.00
IUUC-Mpu-066779	Mustela putorius furo	38.16	1.00e-56	213.00
IUUC-Mlu-067223	Myotis lucifugus	38.52	9.00e-55	207.00
IUUC-Nle-069852	Nomascus leucogenys	37.10	2.00e-54	205.00
IUUC-Ont-072452	Oreochromis niloticus	34.80	7.00e-55	207.00
IUUC-Oan-073163	Ornithorhynchus anatinus	41.82	8.00e-20	88.60
IUUC-Ocu-074628	Oryctolagus cuniculus	37.81	4.00e-56	211.00
IUUC-Oba-075868	Oryza barthii	61.56	3.00e-111	394.00
IUUC-Obr-076768	Oryza brachyantha	63.45	7.00e-114	402.00
IUUC-Ogl-077424	Oryza glaberrima	62.59	1.00e-114	405.00
IUUC-Ogu-078847	Oryza glumaepatula	61.90	9.00e-112	395.00
IUUC-Oin-079495	Oryza indica	62.59	1.00e-114	405.00
IUUC-Olo-080268	Oryza longistaminata	62.24	4.00e-112	397.00
IUUC-Ome-081709	Oryza meridionalis	62.36	8.00e-100	355.00
IUUC-Oni-082749	Oryza nivara	62.59	1.00e-114	405.00
IUUC-Opu-084023	Oryza punctata	52.72	8.00e-88	315.00
IUUC-Oru-084764	Oryza rufipogon	61.90	9.00e-112	395.00
IUUC-Osa-086009	Oryza sativa	62.59	6.00e-115	406.00
IUUC-Ola-086463	Oryzias latipes	32.89	6.00e-47	180.00
IUUC-Olu-087897	Ostreococcus lucimarinus	40.21	2.00e-59	222.00
IUUC-Oga-089114	Otolemur garnettii	38.52	4.00e-58	218.00
IUUC-Ptr-090556	Pan troglodytes	37.10	1.00e-55	209.00
IUUC-Pan-092828	Papio anubis	37.10	1.00e-55	209.00
IUUC-Psi-093609	Pelodiscus sinensis	34.10	4.00e-42	165.00
IUUC-Pma-094413	Petromyzon marinus	33.22	3.00e-44	171.00
IUUC-Ppa-095422	Physcomitrella patens	57.77	1.00e-102	365.00
IUUC-Pfo-096389	Poecilia formosa	35.55	5.00e-55	207.00
IUUC-Pab-098095	Pongo abelii	37.81	3.00e-56	211.00
IUUC-Pop-099612	Populus trichocarpa	72.36	1.00e-138	484.00
IUUC-Pca-100408	Procavia capensis	36.75	1.00e-54	206.00
IUUC-Ppe-101931	Prunus persica	69.80	1.00e-132	465.00
IUUC-Pva-102549	Pteropus vampyrus	37.81	1.00e-56	213.00
IUUC-Rno-105079	Rattus norvegicus	37.46	4.00e-55	209.00
IUUC-Sha-107299	Sarcophilus harrisii	37.81	2.00e-50	193.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.57	3.00e-18	85.10
IUUC-Spo-108122	Schizosaccharomyces pombe	31.64	9.00e-24	103.00
IUUC-Smo-109673	Selaginella moellendorffii	53.02	8.00e-84	302.00
IUUC-Sit-110263	Setaria italica	62.41	2.00e-114	404.00
IUUC-Stu-112713	Solanum tuberosum	98.31	0.00e+00	630.00
IUUC-Sbi-114617	Sorghum bicolor	62.50	6.00e-116	409.00
IUUC-Sre-115136	Sporisorium reilianum	38.16	7.00e-16	77.80
IUUC-Ssc-116268	Sus scrofa	37.81	1.00e-56	214.00
IUUC-Tgu-116720	Taeniopygia guttata	33.90	2.00e-30	126.00
IUUC-Tru-117977	Takifugu rubripes	38.10	1.00e-50	192.00
IUUC-Tsy-119121	Tarsius syrichta	40.00	3.00e-33	134.00
IUUC-Tni-119904	Tetraodon nigroviridis	35.22	1.00e-52	199.00
IUUC-Tca-121718	Theobroma cacao	72.16	2.00e-142	498.00
IUUC-Tae-124364	Triticum aestivum	60.20	9.00e-109	385.00
IUUC-Tme-126922	Tuber melanosporum	24.17	3.00e-14	72.80
IUUC-Tbe-127276	Tupaia belangeri	39.84	1.00e-50	192.00
IUUC-Uma-129505	Ustilago maydis	39.37	5.00e-16	78.60
IUUC-Vpa-130276	Vicugna pacos	37.07	3.00e-37	147.00
IUUC-Vvi-131377	Vitis vinifera	77.88	5.00e-148	518.00
IUUC-Xtr-132529	Xenopus tropicalis	37.19	3.00e-56	212.00
IUUC-Xma-134177	Xiphophorus maculatus	35.88	4.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence