iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107868

Ensembl Protein ID

EEB09495

UniProt Accession

B6K7J1; B6K7J1_SCHJY

Genbank Protein ID

EEB09495.1

Protein Name

Elongator complex subunit Elp2

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_04704

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04704	EEB09495	EEB09495

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-36	120.3	168	203
UBD/Beta-Prp	3.40e-45	152.5	94	424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tl.lvsGsdDgtikvWDlr 31
           gH d+v+cl+f   s+ ++ l+sGs D+ i++W+l+
   Q: 168  GHVDWVRCLEFytnSNsKItLASGSQDKLIRLWSLT 203
           8**********9863333378************985 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.................................lrslsgheaevtavkfspdgk...ilvtgs 71
           ++ +s i+c+++   + +++ g+ dgt  v++++  k                                    +l gh + v++++f  +++   +l++gs
   Q: 94   TTLSSSINCMCI--YDGIVVCGCSDGTCSVFSWDITKQelvkhtkielencipmalsmiytssndakefrlATRLLGHVDWVRCLEFYTNSNskiTLASGS 192
           556789999**9..999*************777666656699999999999999999999999999999988889999999******99988889****** PP
   S: 72   eDrtikvwdls................................tgkcvhtlk....ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..... 131
           +D++i++w+l                                 + ++v        ghed +++++++ +gd l+s s d+ + +w+ ++++ +       
   Q: 193  QDKLIRLWSLTlqaeedapkdeetelgeellmnkpfkfehsgmNMQIVF--DalllGHEDWIMTIKWNSTGDALLSSSTDSSLIIWEADKQTGIWIiaerl 291
           ********888889999***********************766555554..14467******************************9988877766779** PP
   S: 132  ..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwd.lqtgec..vrt 217
                     t +g  g  ++  ++pd++ ++  +  +  r+W  ++g+ +++   +g h  +v+++s++++g++++s +ld+t +l+  l++ge   + +
   Q: 292  gdiasshgstTATGSAGGFWGGLWKPDDSAVACWGRTGGWRIWVNESGEWVQKCsiSG-HAAPVKCVSWEPEGRYFLSTGLDQTTRLFApLKNGEWheMAR 391
           ********************************99********************9666.****************************97477777655555 PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdl 251
            + h   ++s+ +    +r++s++++++ r++d+
   Q: 392  PQIHGYDMNSLYVV-SATRFISCADEKVMRVFDM 424
           56688888888888.789*************985 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MFQYEALITG CNRIPAAASW ASNDILAFGA ESLVAVGDPL HGINCLLSGH KTTINCVNFL 60
QYDDALLIFS ASIDGELKCW KKGGDYGYDC VFTTTLSSSI NCMCIYDGIV VCGCSDGTCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTCAGT ACGAAGCTCT TATAACTGGA TGCAATAGGA TTCCGGCTGC GGCATCTTGG 60
GCGTCCAACG ACATCCTTGC CTTTGGAGCA GAGTCTTTGG TAGCTGTCGG TGATCCTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	30.65	1.00e-79	289.00
IUUC-Aml-002049	Ailuropoda melanoleuca	36.33	2.00e-75	274.00
IUUC-Atr-002456	Amborella trichopoda	31.10	1.00e-89	322.00
IUUC-Apl-004053	Anas platyrhynchos	30.25	1.00e-86	312.00
IUUC-Aca-004535	Anolis carolinensis	32.27	9.00e-81	293.00
IUUC-Aly-005746	Arabidopsis lyrata	31.24	2.00e-89	321.00
IUUC-Ath-006664	Arabidopsis thaliana	31.40	2.00e-86	311.00
IUUC-Ago-007971	Ashbya gossypii	37.01	2.00e-121	427.00
IUUC-Acl-008173	Aspergillus clavatus	39.70	1.00e-135	475.00
IUUC-Afl-008665	Aspergillus flavus	35.50	2.00e-51	194.00
IUUC-Afu-008976	Aspergillus fumigatus	38.32	2.00e-128	451.00
IUUC-Ani-009284	Aspergillus nidulans	37.64	3.00e-130	457.00
IUUC-Ang-009809	Aspergillus niger	38.75	3.00e-134	470.00
IUUC-Aor-009959	Aspergillus oryzae	38.88	1.00e-129	455.00
IUUC-Ate-010442	Aspergillus terreus	39.36	5.00e-135	473.00
IUUC-Ame-011409	Astyanax mexicanus	30.40	3.00e-86	310.00
IUUC-Bgr-012137	Blumeria graminis	38.46	4.00e-128	450.00
IUUC-Bta-012892	Bos taurus	30.49	7.00e-86	310.00
IUUC-Bci-013944	Botrytis cinerea	37.36	1.00e-118	419.00
IUUC-Bdi-014512	Brachypodium distachyon	29.87	3.00e-86	311.00
IUUC-Bol-015741	Brassica oleracea	30.88	6.00e-95	340.00
IUUC-Bra-017367	Brassica rapa	31.39	3.00e-96	344.00
IUUC-Cel-018712	Caenorhabditis elegans	29.14	5.00e-59	220.00
IUUC-Cja-018865	Callithrix jacchus	34.33	4.00e-82	297.00
IUUC-Cfa-021006	Canis familiaris	30.98	6.00e-89	320.00
IUUC-Cpo-021370	Cavia porcellus	30.45	1.00e-85	309.00
IUUC-Csa-023845	Chlorocebus sabaeus	30.59	5.00e-87	313.00
IUUC-Cho-024640	Choloepus hoffmanni	27.23	3.00e-44	171.00
IUUC-Cin-025772	Ciona intestinalis	32.34	5.00e-90	323.00
IUUC-Csv-025891	Ciona savignyi	32.06	5.00e-91	326.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	37.63	7.00e-119	419.00
IUUC-Cne-027081	Cryptococcus neoformans	31.99	3.00e-83	300.00
IUUC-Cme-027225	Cyanidioschyzon merolae	24.47	2.00e-31	129.00
IUUC-Dre-028250	Danio rerio	31.53	2.00e-82	298.00
IUUC-Dno-028847	Dasypus novemcinctus	32.06	2.00e-90	325.00
IUUC-Dor-030351	Dipodomys ordii	31.18	3.00e-88	317.00
IUUC-Dse-031317	Dothistroma septosporum	38.73	6.00e-128	449.00
IUUC-Dme-032019	Drosophila melanogaster	31.90	4.00e-94	337.00
IUUC-Ete-033194	Echinops telfairi	33.01	5.00e-40	157.00
IUUC-Eca-033779	Equus caballus	30.31	3.00e-84	304.00
IUUC-Eeu-034790	Erinaceus europaeus	33.62	1.00e-54	206.00
IUUC-Fca-036090	Felis catus	31.53	3.00e-89	320.00
IUUC-Fal-037663	Ficedula albicollis	33.33	1.00e-81	296.00
IUUC-Fox-037828	Fusarium oxysporum	37.28	3.00e-121	427.00
IUUC-Fso-038462	Fusarium solani	38.84	8.00e-121	426.00
IUUC-Gmo-039450	Gadus morhua	31.25	1.00e-84	305.00
IUUC-Ggr-040023	Gaeumannomyces graminis	31.53	1.00e-102	365.00
IUUC-Gga-040480	Gallus gallus	29.86	1.00e-84	305.00
IUUC-Gac-041544	Gasterosteus aculeatus	30.81	4.00e-90	323.00
IUUC-Gma-044048	Glycine max	30.14	1.00e-86	312.00
IUUC-Ggo-045381	Gorilla gorilla	29.43	7.00e-78	283.00
IUUC-Hsa-046096	Homo sapiens	34.17	1.00e-82	299.00
IUUC-Hvu-047494	Hordeum vulgare	31.45	2.00e-86	311.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	32.63	4.00e-71	260.00
IUUC-Kpa-049241	Komagataella pastoris	35.09	2.00e-104	371.00
IUUC-Lch-050512	Latimeria chalumnae	33.70	6.00e-84	303.00
IUUC-Lpe-051448	Leersia perrieri	30.92	3.00e-85	307.00
IUUC-Loc-051882	Lepisosteus oculatus	30.82	1.00e-90	325.00
IUUC-Lma-053023	Leptosphaeria maculans	38.57	2.00e-127	447.00
IUUC-Laf-054519	Loxodonta africana	30.83	3.00e-88	317.00
IUUC-Mcc-055580	Macaca mulatta	34.06	1.00e-81	296.00
IUUC-Meu-056606	Macropus eugenii	35.32	3.00e-27	115.00
IUUC-Mor-057109	Magnaporthe oryzae	35.83	4.00e-123	433.00
IUUC-Mpo-057297	Magnaporthe poae	31.19	2.00e-105	375.00
IUUC-Mtr-058348	Medicago truncatula	30.24	2.00e-88	318.00
IUUC-Mla-059159	Melampsora laricipopulina	29.37	7.00e-62	230.00
IUUC-Mga-059778	Meleagris gallopavo	33.33	2.00e-50	192.00
IUUC-Mvi-060447	Microbotryum violaceum	30.55	9.00e-83	299.00
IUUC-Mmr-061139	Microcebus murinus	34.39	8.00e-83	299.00
IUUC-Mdo-061866	Monodelphis domestica	30.64	1.00e-84	305.00
IUUC-Mmu-063390	Mus musculus	29.95	4.00e-83	300.00
IUUC-Mac-064693	Musa acuminata	31.62	1.00e-90	325.00
IUUC-Mpu-066547	Mustela putorius furo	31.56	4.00e-84	303.00
IUUC-Mlu-067156	Myotis lucifugus	30.24	6.00e-84	303.00
IUUC-Nfi-068616	Neosartorya fischeri	38.88	2.00e-130	458.00
IUUC-Ncr-068915	Neurospora crassa	33.70	2.00e-108	385.00
IUUC-Nle-069958	Nomascus leucogenys	30.77	2.00e-84	305.00
IUUC-Opr-071093	Ochotona princeps	25.26	6.00e-24	103.00
IUUC-Ont-072178	Oreochromis niloticus	30.54	5.00e-90	323.00
IUUC-Oan-073667	Ornithorhynchus anatinus	29.03	2.00e-83	301.00
IUUC-Ocu-074662	Oryctolagus cuniculus	31.33	3.00e-89	320.00
IUUC-Oba-075577	Oryza barthii	30.92	3.00e-88	317.00
IUUC-Obr-076566	Oryza brachyantha	30.92	7.00e-88	316.00
IUUC-Ogl-077054	Oryza glaberrima	30.88	3.00e-88	317.00
IUUC-Ogu-078846	Oryza glumaepatula	31.58	3.00e-87	314.00
IUUC-Oin-079084	Oryza indica	31.97	1.00e-88	318.00
IUUC-Olo-080933	Oryza longistaminata	27.75	2.00e-67	248.00
IUUC-Ome-081500	Oryza meridionalis	29.63	1.00e-75	275.00
IUUC-Oni-082352	Oryza nivara	31.23	3.00e-88	317.00
IUUC-Opu-084116	Oryza punctata	32.12	1.00e-89	322.00
IUUC-Oru-085249	Oryza rufipogon	31.97	1.00e-88	318.00
IUUC-Osa-086270	Oryza sativa	31.97	1.00e-88	318.00
IUUC-Ola-086625	Oryzias latipes	27.24	1.00e-67	249.00
IUUC-Olu-087638	Ostreococcus lucimarinus	27.93	2.00e-57	214.00
IUUC-Oga-088634	Otolemur garnettii	33.11	5.00e-74	270.00
IUUC-Oar-089475	Ovis aries	30.83	3.00e-85	308.00
IUUC-Ptr-091131	Pan troglodytes	30.33	2.00e-86	311.00
IUUC-Pan-092869	Papio anubis	30.27	9.00e-87	312.00
IUUC-Psi-093146	Pelodiscus sinensis	33.84	2.00e-80	291.00
IUUC-Pma-094479	Petromyzon marinus	33.53	1.00e-80	292.00
IUUC-Pno-095061	Phaeosphaeria nodorum	35.24	1.00e-90	325.00
IUUC-Ppa-095618	Physcomitrella patens	31.40	4.00e-85	308.00
IUUC-Pfo-096816	Poecilia formosa	29.12	9.00e-84	303.00
IUUC-Pab-097548	Pongo abelii	30.63	7.00e-87	313.00
IUUC-Pop-099643	Populus trichocarpa	30.02	4.00e-90	323.00
IUUC-Pca-100983	Procavia capensis	25.75	5.00e-29	120.00
IUUC-Ppe-101301	Prunus persica	31.04	2.00e-88	318.00
IUUC-Pva-102460	Pteropus vampyrus	30.64	1.00e-84	305.00
IUUC-Pgr-103507	Puccinia graminis	29.76	1.00e-64	239.00
IUUC-Ptt-103892	Puccinia triticina	28.94	1.00e-55	209.00
IUUC-Pte-104283	Pyrenophora teres	37.04	3.00e-120	423.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	34.80	4.00e-112	397.00
IUUC-Rno-105842	Rattus norvegicus	31.61	2.00e-82	298.00
IUUC-Sce-106459	Saccharomyces cerevisiae	35.90	1.00e-109	388.00
IUUC-Sha-106586	Sarcophilus harrisii	32.49	1.00e-48	186.00
IUUC-Spo-108302	Schizosaccharomyces pombe	53.47	0.00e+00	746.00
IUUC-Smo-108919	Selaginella moellendorffii	31.81	3.00e-88	317.00
IUUC-Sit-109915	Setaria italica	30.20	4.00e-88	317.00
IUUC-Sly-111714	Solanum lycopersicum	31.65	2.00e-91	328.00
IUUC-Stu-112631	Solanum tuberosum	30.89	6.00e-90	323.00
IUUC-Sar-113200	Sorex araneus	28.92	4.00e-68	251.00
IUUC-Sbi-114582	Sorghum bicolor	29.38	2.00e-88	318.00
IUUC-Sre-115001	Sporisorium reilianum	34.80	1.00e-38	153.00
IUUC-Ssc-115519	Sus scrofa	30.98	8.00e-87	313.00
IUUC-Tgu-116987	Taeniopygia guttata	29.15	1.00e-76	278.00
IUUC-Tru-118476	Takifugu rubripes	29.94	2.00e-81	295.00
IUUC-Tsy-119230	Tarsius syrichta	36.59	5.00e-52	197.00
IUUC-Tni-120448	Tetraodon nigroviridis	24.04	1.00e-14	73.20
IUUC-Tca-121650	Theobroma cacao	31.52	1.00e-88	319.00
IUUC-Tre-122086	Trichoderma reesei	39.29	5.00e-116	409.00
IUUC-Tvi-122397	Trichoderma virens	39.01	3.00e-110	390.00
IUUC-Tae-123972	Triticum aestivum	31.38	5.00e-87	313.00
IUUC-Tur-126578	Triticum urartu	31.53	7.00e-87	313.00
IUUC-Tme-126927	Tuber melanosporum	38.18	2.00e-122	431.00
IUUC-Tbe-127922	Tupaia belangeri	42.11	8.00e-39	153.00
IUUC-Ttr-128918	Tursiops truncatus	30.84	3.00e-86	310.00
IUUC-Uma-129474	Ustilago maydis	34.27	1.00e-38	153.00
IUUC-Vda-129944	Verticillium dahliae	37.93	8.00e-117	412.00
IUUC-Vpa-130693	Vicugna pacos	31.01	7.00e-83	299.00
IUUC-Vvi-130949	Vitis vinifera	31.39	2.00e-88	318.00
IUUC-Xtr-132639	Xenopus tropicalis	33.48	8.00e-83	299.00
IUUC-Xma-134223	Xiphophorus maculatus	35.27	1.00e-69	255.00
IUUC-Yli-134601	Yarrowia lipolytica	37.01	3.00e-113	400.00
IUUC-Zma-135952	Zea mays	31.25	1.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence