iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095605

Ensembl Protein ID

PP1S89_237V6.1

UniProt Accession

A9SKV5; A9SKV5_PHYPA

Genbank Protein ID

EDQ68224.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544978

Gene Name

PHYPADRAFT_131518

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S89_237V6	PP1S89_237V6.1	PP1S89_237V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-17	62.9	620	655

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           H   +tcl+   s+  +++G++Dg++ ++D+rtg +
   Q: 620  HDTYITCLDTnaSGSCVITGAGDGSVSLFDVRTGGS 655
           67789999998766779****************975 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDGESSMGQS SASEDKKRLR DQSNNGDGLL VNRGKPVSEK WKPVWLWLQS LGRTRIVDSA 60
EVTAWLESNP AYAAEMRQYH THGVLVHYVQ KCHQRLVYGR NYKGEGKKLT KKVIGIQPPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTGCAATC CTCGCCAATT TCTTCCCGCC CTGGCGCTGA CATCATCATC AACTCCTCCC 60
TCCTGGACGT GGTGTGAAGA AGGTTTGGGG CCCTTCCTTC CATCACCACC ACCTGCTTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023294--Tachylectin2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_131518

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000846	Aegilops tauschii	43.92	5.00e-118	417.00
IUUC-Atr-002668	Amborella trichopoda	57.91	4.00e-147	514.00
IUUC-Bdi-014501	Brachypodium distachyon	47.79	5.00e-128	451.00
IUUC-Lpe-051545	Leersia perrieri	50.65	2.00e-109	389.00
IUUC-Mac-064887	Musa acuminata	53.00	2.00e-83	301.00
IUUC-Oba-074978	Oryza barthii	45.70	7.00e-70	257.00
IUUC-Obr-076372	Oryza brachyantha	47.50	3.00e-133	468.00
IUUC-Ogl-076950	Oryza glaberrima	49.30	1.00e-129	456.00
IUUC-Ogu-078500	Oryza glumaepatula	51.01	6.00e-92	331.00
IUUC-Oin-079488	Oryza indica	47.55	1.00e-102	366.00
IUUC-Olo-080491	Oryza longistaminata	39.68	4.00e-76	278.00
IUUC-Oni-082022	Oryza nivara	51.01	7.00e-92	330.00
IUUC-Opu-083211	Oryza punctata	44.06	6.00e-132	464.00
IUUC-Oru-085018	Oryza rufipogon	51.01	4.00e-92	331.00
IUUC-Osa-085998	Oryza sativa	49.10	3.00e-129	455.00
IUUC-Smo-109202	Selaginella moellendorffii	53.96	1.00e-152	531.00
IUUC-Sit-110580	Setaria italica	48.41	3.00e-122	432.00
IUUC-Sbi-114718	Sorghum bicolor	47.81	2.00e-139	489.00
IUUC-Tae-125712	Triticum aestivum	47.39	1.00e-122	432.00
IUUC-Tur-126661	Triticum urartu	41.31	3.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence