iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014282

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100830436; BRADI_3g42280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G42280	BRADI3G42280.1	BRADI3G42280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.6	191	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+   ++  + lp CgH+fh+ C+  w       +++++CPlCr
   Q: 191  CSVCLHDMeagET-ARRLPdCGHTFHLACIDGW------LCRHASCPLCR 233
           9*******55433.677778*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEAAARGGEA HTVDTSAFPP AFFSGSDHQD AAAALPARVA GAVVRGIITF VFATVGTILG 60
AITGGLIGLA TESGLVRGAG IGAISGAVVA MEVVDRCLAI WRSDQSAIWS VLYVLDVIWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGG CAGCAAGAGG AGGAGAAGCT CACACCGTCG ACACATCAGC GTTTCCTCCC 60
GCCTTCTTCT CTGGCAGCGA CCACCAGGAC GCGGCCGCCG CGTTGCCGGC TCGCGTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF17123--zf-RING_11

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100830436

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000637	Aegilops tauschii	77.03	1.00e-81	295.00
IUUC-Dno-029105	Dasypus novemcinctus	36.94	4.00e-15	75.90
IUUC-Gac-041767	Gasterosteus aculeatus	40.00	1.00e-14	74.30
IUUC-Hvu-047681	Hordeum vulgare	74.70	2.00e-83	300.00
IUUC-Lpe-051116	Leersia perrieri	71.00	8.00e-59	219.00
IUUC-Ont-071511	Oreochromis niloticus	40.00	8.00e-15	74.70
IUUC-Oba-075950	Oryza barthii	70.05	2.00e-56	211.00
IUUC-Obr-076601	Oryza brachyantha	63.01	7.00e-45	171.00
IUUC-Ogl-077407	Oryza glaberrima	70.05	2.00e-56	211.00
IUUC-Ogu-078930	Oryza glumaepatula	73.60	1.00e-56	212.00
IUUC-Oin-079563	Oryza indica	70.05	1.00e-56	212.00
IUUC-Ome-081578	Oryza meridionalis	73.74	7.00e-63	233.00
IUUC-Oni-082159	Oryza nivara	70.05	9.00e-57	212.00
IUUC-Opu-083894	Oryza punctata	65.83	2.00e-60	224.00
IUUC-Oru-084967	Oryza rufipogon	73.60	1.00e-56	212.00
IUUC-Osa-085796	Oryza sativa	70.05	9.00e-57	212.00
IUUC-Ola-087461	Oryzias latipes	40.00	8.00e-15	74.70
IUUC-Sit-110188	Setaria italica	72.59	5.00e-65	239.00
IUUC-Sbi-113894	Sorghum bicolor	67.94	9.00e-63	232.00
IUUC-Tae-124947	Triticum aestivum	77.03	1.00e-81	295.00
IUUC-Xma-133076	Xiphophorus maculatus	40.00	1.00e-14	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence