iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099484

UUCD1 version

UUC-PoT-01580

Ensembl Protein ID

POPTR_0007s12350.1

UniProt Accession

A9PAZ9; A9PAZ9_POPTR

Genbank Protein ID

ABK93552.1; EEE90650.1

Protein Name

RUB1 CONJUGATING ENZYME 1 family protein

Genbank Nucleotide ID

EF145391; CM000343

Gene Name

POPTRDRAFT_719434; POPTR_0007s12350g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s12350	POPTR_0007s12350.1	POPTR_0007s12350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.60e-36	126.2	33	166

Active Site

Position(s)	Description	Evidence
112	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           Rl+k+++el+  ++ +++  p+ ++dl+ +ev i  p++ +Y gg+F +++++++ YP ++Pkvk+ tk++hPn++ +G+vCl+il+  e+
   Q: 33   RLHKDISELNLPKSCTMTF-PNGKDDLMSFEVSIR-PDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR--ED 119
           899*****95544444443.455558********9.**************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           W+p+l+++++++++  l++epn+e+pln++aa  l++n+++++++vr
   Q: 120  WKPVLNINTIIYGLYHLFTEPNYEDPLNHDAAAVLRDNPKMFESNVR 166
           *********************************************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIRLFKVKEK QRELAENANG GVPIKKQSAG ELRLHKDISE LNLPKSCTMT FPNGKDDLMS 60
FEVSIRPDEG YYLGGTFLFS FQVSPIYPHE APKVKCKTKV YHPNIDLEGN VCLNILREDW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGTGGGT CCCGCCTTCA TTACTCGTAA ATAATTTGCA TAGCCAAATC TGTGTGCACT 60
GTGCAACAGA GAAATTCCCC TTTCCCCTCG TTTTATAAAA AGGCTTGCTC GTAAATCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0019788--F:NEDD8 transferase activity
GO:0045116--P:protein neddylation

KEGG

pop:POPTR_0007s12350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000196	Aegilops tauschii	78.23	1.00e-69	254.00
IUUC-Atr-003170	Amborella trichopoda	90.71	3.00e-100	356.00
IUUC-Aly-005638	Arabidopsis lyrata	85.87	1.00e-95	340.00
IUUC-Ath-006876	Arabidopsis thaliana	85.87	1.00e-95	340.00
IUUC-Bgr-012306	Blumeria graminis	52.22	2.00e-51	194.00
IUUC-Bci-013626	Botrytis cinerea	51.09	3.00e-52	197.00
IUUC-Bdi-014528	Brachypodium distachyon	78.57	2.00e-83	300.00
IUUC-Bol-015241	Brassica oleracea	85.41	3.00e-95	339.00
IUUC-Bra-017028	Brassica rapa	85.41	5.00e-95	339.00
IUUC-Cre-022865	Chlamydomonas reinhardtii	60.69	6.00e-54	202.00
IUUC-Gac-041480	Gasterosteus aculeatus	41.73	1.00e-24	105.00
IUUC-Gma-043805	Glycine max	93.99	2.00e-103	367.00
IUUC-Hvu-047056	Hordeum vulgare	76.37	3.00e-84	303.00
IUUC-Kpa-049315	Komagataella pastoris	47.46	6.00e-45	172.00
IUUC-Lpe-050743	Leersia perrieri	79.07	7.00e-83	298.00
IUUC-Loc-052137	Lepisosteus oculatus	39.55	2.00e-23	101.00
IUUC-Mtr-058251	Medicago truncatula	91.80	2.00e-101	360.00
IUUC-Mdo-061993	Monodelphis domestica	39.71	1.00e-23	102.00
IUUC-Mac-064967	Musa acuminata	80.87	7.00e-90	322.00
IUUC-Mpu-066423	Mustela putorius furo	39.16	9.00e-24	102.00
IUUC-Oba-075825	Oryza barthii	79.12	3.00e-88	316.00
IUUC-Obr-076067	Oryza brachyantha	79.67	2.00e-88	317.00
IUUC-Ogl-077594	Oryza glaberrima	79.12	3.00e-88	316.00
IUUC-Ogu-078073	Oryza glumaepatula	79.12	3.00e-88	316.00
IUUC-Oin-080060	Oryza indica	75.41	7.00e-79	286.00
IUUC-Olo-080314	Oryza longistaminata	79.12	1.00e-88	317.00
IUUC-Ome-081713	Oryza meridionalis	79.12	3.00e-88	317.00
IUUC-Oni-082426	Oryza nivara	79.12	3.00e-88	316.00
IUUC-Opu-083942	Oryza punctata	79.19	3.00e-83	300.00
IUUC-Oru-085104	Oryza rufipogon	79.12	3.00e-88	316.00
IUUC-Osa-086168	Oryza sativa	79.12	2.00e-88	317.00
IUUC-Pma-094321	Petromyzon marinus	42.74	4.00e-22	96.30
IUUC-Ppe-101216	Prunus persica	89.62	2.00e-92	330.00
IUUC-Sja-107789	Schizosaccharomyces japonicus	46.37	3.00e-43	167.00
IUUC-Ssl-108427	Sclerotinia sclerotiorum	51.11	4.00e-51	193.00
IUUC-Smo-109330	Selaginella moellendorffii	70.11	1.00e-77	281.00
IUUC-Sit-109702	Setaria italica	79.12	2.00e-80	290.00
IUUC-Sly-111045	Solanum lycopersicum	88.52	4.00e-98	349.00
IUUC-Sbi-114357	Sorghum bicolor	78.02	3.00e-79	286.00
IUUC-Ssc-115597	Sus scrofa	40.29	5.00e-24	103.00
IUUC-Tgu-117397	Taeniopygia guttata	40.44	6.00e-24	102.00
IUUC-Tru-118496	Takifugu rubripes	40.14	2.00e-25	107.00
IUUC-Tni-119674	Tetraodon nigroviridis	52.15	8.00e-50	189.00
IUUC-Tca-121359	Theobroma cacao	90.16	5.00e-101	358.00
IUUC-Tae-124489	Triticum aestivum	76.37	3.00e-84	303.00
IUUC-Tur-126125	Triticum urartu	76.37	7.00e-85	306.00
IUUC-Vvi-131182	Vitis vinifera	91.26	7.00e-102	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence