iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080493

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539125.1_FG004	KN539125.1_FGT004	KN539125.1_FGP004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-24	84.5	349	420

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+CpI  e+Mr+P+++++G ty+  +I+ wl+ g++ +P+t+qp+ +++l+Pnl+lr++iq++  +n+
   Q: 349  TPSYFICPILQEVMREPCIASDGFTYETDAIRSWLDGGRRVSPITGQPIVHQQLIPNLSLRSVIQDHARRNQ 420
           599***************************************************************999987 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAAPEKVFVA LPAEAKSGRS TLSWALGHFR DAGATVVVVV AHVHVPPQMI PVMGVKFHAS 60
KLNPEQVSLF RMAERDKVDK QLDHYVNQCL SMKMKCEKLV IENENVVDGL VELINLHGVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGC CGGAGAAGGT GTTCGTGGCG CTGCCGGCGG AGGCGAAGTC CGGCAGGTCG 60
ACGCTGTCGT GGGCTCTCGG CCATTTCCGG GACGCCGGAG CCACGGTCGT CGTCGTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051298	Leersia perrieri	74.13	2.00e-173	600.00
IUUC-Oba-075683	Oryza barthii	92.41	0.00e+00	712.00
IUUC-Obr-076714	Oryza brachyantha	74.89	4.00e-170	590.00
IUUC-Ogl-077008	Oryza glaberrima	92.41	0.00e+00	713.00
IUUC-Ogu-078004	Oryza glumaepatula	92.18	0.00e+00	743.00
IUUC-Oin-079704	Oryza indica	92.41	0.00e+00	747.00
IUUC-Ome-081254	Oryza meridionalis	92.64	0.00e+00	744.00
IUUC-Oni-083101	Oryza nivara	92.64	0.00e+00	749.00
IUUC-Opu-084030	Oryza punctata	89.89	0.00e+00	719.00
IUUC-Oru-084389	Oryza rufipogon	92.87	0.00e+00	753.00
IUUC-Osa-085772	Oryza sativa	92.87	0.00e+00	753.00
IUUC-Sit-110620	Setaria italica	60.98	2.00e-127	447.00
IUUC-Sbi-113827	Sorghum bicolor	57.59	5.00e-112	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence