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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-106076
Ensembl Protein ID ENSRNOP00000072178.1
UniProt Accession A0A0G2K2B7; A0A0G2K2B7_RAT
Genbank Protein ID ENSRNOP00000072178
Protein Name WD repeat domain 20
Genbank Nucleotide ID AC121220
Gene Name Wdr20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000007333.7 ENSRNOT00000009709.7 ENSRNOP00000009709.5
ENSRNOG00000007333.7 ENSRNOT00000082595.1 ENSRNOP00000072178.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.00e-12 47.2 266 294
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtg 33
            c+++ +d +++v+G+ D  + vW++ ++
   Q: 266  LCVCWsPDgKYIVTGGEDDLVTVWSFLDC 294
           6*****999***************97665 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV SFVNLNDQSG 60
NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ PTCHDFNHLT ATAESVSLLV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-106076|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGGGCTGGC TCGCCAATGG GCGGGGCCGC GAAGAAGGGG GTGGGGAGTG GAGAGCGAGC 60
GGCCGAGGAC GGCGCCTGCG CGGTGGGCGT GATCCGGGCA CTTAGGGCAG GATGAACGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-106076|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0016579--P:protein deubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000844 Aegilops tauschii 34.48 5.00e-33 134.00
IUUC-Aml-001749 Ailuropoda melanoleuca 94.51 0.00e+00 1072.00
IUUC-Atr-002459 Amborella trichopoda 37.65 1.00e-54 207.00
IUUC-Apl-003710 Anas platyrhynchos 95.30 0.00e+00 943.00
IUUC-Aca-004914 Anolis carolinensis 94.57 0.00e+00 1090.00
IUUC-Aly-005833 Arabidopsis lyrata 37.02 1.00e-55 210.00
IUUC-Ath-006649 Arabidopsis thaliana 37.02 1.00e-55 210.00
IUUC-Acl-008348 Aspergillus clavatus 33.61 1.00e-56 213.00
IUUC-Afl-008642 Aspergillus flavus 33.89 2.00e-57 217.00
IUUC-Ani-009266 Aspergillus nidulans 32.28 7.00e-53 201.00
IUUC-Ang-009614 Aspergillus niger 33.79 4.00e-56 212.00
IUUC-Aor-010159 Aspergillus oryzae 33.89 2.00e-57 217.00
IUUC-Ate-010476 Aspergillus terreus 34.95 7.00e-58 218.00
IUUC-Ame-010700 Astyanax mexicanus 88.34 0.00e+00 1064.00
IUUC-Bta-013293 Bos taurus 95.74 0.00e+00 1036.00
IUUC-Bdi-014307 Brachypodium distachyon 36.15 9.00e-52 197.00
IUUC-Bol-015990 Brassica oleracea 37.02 1.00e-54 207.00
IUUC-Cel-018407 Caenorhabditis elegans 38.20 1.00e-120 427.00
IUUC-Cja-019007 Callithrix jacchus 93.00 0.00e+00 1123.00
IUUC-Cfa-020697 Canis familiaris 95.91 0.00e+00 711.00
IUUC-Cpo-022464 Cavia porcellus 89.08 0.00e+00 955.00
IUUC-Csa-023594 Chlorocebus sabaeus 98.23 0.00e+00 1159.00
IUUC-Cho-024294 Choloepus hoffmanni 97.64 5.00e-174 604.00
IUUC-Cin-025617 Ciona intestinalis 48.94 8.00e-88 317.00
IUUC-Csv-026120 Ciona savignyi 49.01 1.00e-53 202.00
IUUC-Cgl-026394 Colletotrichum gloeosporioides 32.23 7.00e-54 205.00
IUUC-Cne-026940 Cryptococcus neoformans 27.70 1.00e-30 128.00
IUUC-Cme-027228 Cyanidioschyzon merolae 28.62 4.00e-21 97.10
IUUC-Dre-027892 Danio rerio 86.68 0.00e+00 1028.00
IUUC-Dno-029016 Dasypus novemcinctus 96.88 0.00e+00 1080.00
IUUC-Dor-030179 Dipodomys ordii 88.30 0.00e+00 998.00
IUUC-Dse-031362 Dothistroma septosporum 29.95 3.00e-46 179.00
IUUC-Dme-031790 Drosophila melanogaster 52.38 1.00e-109 390.00
IUUC-Eca-033704 Equus caballus 96.76 0.00e+00 897.00
IUUC-Eeu-034912 Erinaceus europaeus 92.42 0.00e+00 646.00
IUUC-Fca-036140 Felis catus 97.16 0.00e+00 1080.00
IUUC-Fal-037163 Ficedula albicollis 95.45 0.00e+00 1112.00
IUUC-Fox-037668 Fusarium oxysporum 32.00 3.00e-14 73.60
IUUC-Fso-038140 Fusarium solani 33.43 9.00e-54 204.00
IUUC-Gmo-039220 Gadus morhua 86.05 0.00e+00 1036.00
IUUC-Ggr-039757 Gaeumannomyces graminis 30.83 3.00e-52 199.00
IUUC-Gga-040768 Gallus gallus 95.27 0.00e+00 1113.00
IUUC-Gac-042612 Gasterosteus aculeatus 88.10 0.00e+00 1059.00
IUUC-Gma-044186 Glycine max 37.47 4.00e-57 215.00
IUUC-Ggo-045322 Gorilla gorilla 93.28 0.00e+00 1144.00
IUUC-Hsa-046440 Homo sapiens 93.11 0.00e+00 1142.00
IUUC-Hvu-047057 Hordeum vulgare 31.58 8.00e-23 100.00
IUUC-Itr-048055 Ictidomys tridecemlineatus 98.02 0.00e+00 1139.00
IUUC-Lch-049678 Latimeria chalumnae 92.83 0.00e+00 1102.00
IUUC-Lpe-051378 Leersia perrieri 36.39 2.00e-51 197.00
IUUC-Loc-051970 Lepisosteus oculatus 90.77 0.00e+00 1072.00
IUUC-Laf-053660 Loxodonta africana 97.34 0.00e+00 1109.00
IUUC-Mcc-055671 Macaca mulatta 96.72 0.00e+00 986.00
IUUC-Meu-056346 Macropus eugenii 96.18 0.00e+00 646.00
IUUC-Mpo-057472 Magnaporthe poae 31.50 1.00e-52 201.00
IUUC-Mtr-058649 Medicago truncatula 38.12 3.00e-56 213.00
IUUC-Mla-059179 Melampsora laricipopulina 30.42 3.00e-29 123.00
IUUC-Mga-059701 Meleagris gallopavo 94.89 0.00e+00 942.00
IUUC-Mmr-060982 Microcebus murinus 93.45 0.00e+00 1147.00
IUUC-Mdo-062998 Monodelphis domestica 95.80 0.00e+00 1080.00
IUUC-Mmu-064199 Mus musculus 98.58 0.00e+00 1158.00
IUUC-Mac-065546 Musa acuminata 35.71 1.00e-51 197.00
IUUC-Mpu-066310 Mustela putorius furo 96.81 0.00e+00 1063.00
IUUC-Mlu-068216 Myotis lucifugus 96.45 0.00e+00 1100.00
IUUC-Nfi-068256 Neosartorya fischeri 33.89 3.00e-56 213.00
IUUC-Ncr-068904 Neurospora crassa 28.73 2.00e-54 206.00
IUUC-Nle-069233 Nomascus leucogenys 98.05 0.00e+00 1157.00
IUUC-Opr-071024 Ochotona princeps 96.28 0.00e+00 1045.00
IUUC-Ont-072202 Oreochromis niloticus 87.67 0.00e+00 1053.00
IUUC-Oan-073075 Ornithorhynchus anatinus 95.49 0.00e+00 945.00
IUUC-Ocu-073978 Oryctolagus cuniculus 98.05 0.00e+00 1156.00
IUUC-Oba-075973 Oryza barthii 35.26 4.00e-52 199.00
IUUC-Obr-076346 Oryza brachyantha 36.69 8.00e-52 198.00
IUUC-Ogl-077048 Oryza glaberrima 36.09 5.00e-51 195.00
IUUC-Ogu-078225 Oryza glumaepatula 35.26 1.00e-47 184.00
IUUC-Oin-079597 Oryza indica 35.53 4.00e-55 209.00
IUUC-Olo-080349 Oryza longistaminata 40.77 3.00e-23 102.00
IUUC-Oni-082556 Oryza nivara 35.26 6.00e-52 198.00
IUUC-Opu-083344 Oryza punctata 35.67 6.00e-54 205.00
IUUC-Oru-085085 Oryza rufipogon 35.53 3.00e-55 209.00
IUUC-Osa-085527 Oryza sativa 35.53 9.00e-55 207.00
IUUC-Ola-086647 Oryzias latipes 87.16 0.00e+00 1045.00
IUUC-Olu-087793 Ostreococcus lucimarinus 31.67 5.00e-22 98.60
IUUC-Oga-088879 Otolemur garnettii 95.83 0.00e+00 1147.00
IUUC-Oar-089333 Ovis aries 95.40 0.00e+00 1023.00
IUUC-Ptr-090538 Pan troglodytes 92.80 0.00e+00 1143.00
IUUC-Pan-092473 Papio anubis 97.77 0.00e+00 1197.00
IUUC-Psi-094013 Pelodiscus sinensis 95.10 0.00e+00 1112.00
IUUC-Ppa-095812 Physcomitrella patens 37.50 7.00e-56 211.00
IUUC-Pfo-096913 Poecilia formosa 86.76 0.00e+00 981.00
IUUC-Pab-098503 Pongo abelii 96.03 0.00e+00 1159.00
IUUC-Pop-099670 Populus trichocarpa 36.51 9.00e-53 201.00
IUUC-Pca-100287 Procavia capensis 96.09 0.00e+00 1108.00
IUUC-Ppe-101841 Prunus persica 35.92 4.00e-55 209.00
IUUC-Pva-102826 Pteropus vampyrus 96.45 0.00e+00 1097.00
IUUC-Pgr-103681 Puccinia graminis 29.75 6.00e-31 129.00
IUUC-Sha-107220 Sarcophilus harrisii 94.05 0.00e+00 1096.00
IUUC-Sja-107886 Schizosaccharomyces japonicus 29.20 2.00e-36 147.00
IUUC-Spo-108343 Schizosaccharomyces pombe 31.30 1.00e-40 161.00
IUUC-Smo-108846 Selaginella moellendorffii 38.66 4.00e-59 222.00
IUUC-Sit-109904 Setaria italica 36.00 8.00e-55 208.00
IUUC-Sly-111266 Solanum lycopersicum 37.35 1.00e-55 210.00
IUUC-Stu-112818 Solanum tuberosum 36.18 3.00e-55 209.00
IUUC-Sbi-114804 Sorghum bicolor 36.62 7.00e-54 204.00
IUUC-Ssc-116048 Sus scrofa 95.50 0.00e+00 1071.00
IUUC-Tgu-116514 Taeniopygia guttata 96.48 0.00e+00 951.00
IUUC-Tru-117529 Takifugu rubripes 87.39 0.00e+00 1053.00
IUUC-Tsy-119611 Tarsius syrichta 97.87 0.00e+00 1154.00
IUUC-Tni-120859 Tetraodon nigroviridis 89.04 0.00e+00 1016.00
IUUC-Tca-121339 Theobroma cacao 37.40 6.00e-56 211.00
IUUC-Tre-122206 Trichoderma reesei 31.32 4.00e-48 186.00
IUUC-Tvi-122377 Trichoderma virens 32.77 1.00e-47 184.00
IUUC-Tae-124346 Triticum aestivum 38.73 1.00e-51 197.00
IUUC-Tur-126428 Triticum urartu 31.31 5.00e-33 135.00
IUUC-Tme-126969 Tuber melanosporum 35.42 3.00e-56 213.00
IUUC-Tbe-127985 Tupaia belangeri 92.21 0.00e+00 974.00
IUUC-Ttr-128936 Tursiops truncatus 96.45 0.00e+00 1101.00
IUUC-Vda-129875 Verticillium dahliae 32.95 6.00e-53 202.00
IUUC-Vvi-131155 Vitis vinifera 37.94 2.00e-55 210.00
IUUC-Xtr-131864 Xenopus tropicalis 92.99 0.00e+00 1080.00
IUUC-Xma-133459 Xiphophorus maculatus 86.62 0.00e+00 1004.00
IUUC-Zma-135634 Zea mays 36.90 3.00e-54 206.00
Created Date 25-Jun-2017

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