iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080409

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538896.1_FG022	KN538896.1_FGT022	KN538896.1_FGP022

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-13	49.9	282	314

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++cl+f ++ +l+ +Gs  g  ++WDlrt ++l
   Q: 282  IRCLSFsTSgHLIFAGSSAGYAHCWDLRTLRPL 314
           9*****944599****************98876 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

METSSSRGRS GRAGLKRRRG PGGGGGGSGS TAQALNDDTL RSVFSRLDDH FDLARCSAVC 60
NSWNRVIDTA HLMRDLYYKR NPQARSSGSN TSIKSYFKEL ALDEHASSFS RGPAEVYQWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGACGA GCAGCAGCCG GGGACGGAGC GGGAGAGCTG GATTGAAGCG CCGCAGGGGC 60
CCCGGCGGCG GCGGCGGCGG GTCGGGGTCG ACGGCGCAGG CGCTGAACGA CGACACCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	43.27	2.00e-77	281.00
IUUC-Aly-005690	Arabidopsis lyrata	36.93	3.00e-81	294.00
IUUC-Ath-006699	Arabidopsis thaliana	37.25	6.00e-82	296.00
IUUC-Bdi-014108	Brachypodium distachyon	70.67	4.00e-177	613.00
IUUC-Bol-015377	Brassica oleracea	38.61	5.00e-86	310.00
IUUC-Bra-016934	Brassica rapa	39.70	6.00e-73	266.00
IUUC-Gma-043394	Glycine max	41.04	2.00e-83	301.00
IUUC-Lpe-051613	Leersia perrieri	87.31	0.00e+00	712.00
IUUC-Mtr-057690	Medicago truncatula	40.39	9.00e-86	309.00
IUUC-Mac-064938	Musa acuminata	54.26	1.00e-96	345.00
IUUC-Oba-075418	Oryza barthii	88.10	0.00e+00	669.00
IUUC-Obr-076882	Oryza brachyantha	82.62	0.00e+00	707.00
IUUC-Ogl-077438	Oryza glaberrima	89.05	0.00e+00	753.00
IUUC-Ogu-078943	Oryza glumaepatula	89.52	0.00e+00	758.00
IUUC-Oin-079069	Oryza indica	89.29	0.00e+00	756.00
IUUC-Oni-083056	Oryza nivara	88.57	0.00e+00	751.00
IUUC-Opu-084172	Oryza punctata	84.69	0.00e+00	721.00
IUUC-Oru-085030	Oryza rufipogon	89.05	0.00e+00	754.00
IUUC-Osa-085520	Oryza sativa	89.05	0.00e+00	754.00
IUUC-Ppa-095450	Physcomitrella patens	28.92	4.00e-34	138.00
IUUC-Pop-099796	Populus trichocarpa	42.72	2.00e-88	318.00
IUUC-Ppe-101252	Prunus persica	40.95	7.00e-85	306.00
IUUC-Smo-108718	Selaginella moellendorffii	29.77	2.00e-26	112.00
IUUC-Sit-109830	Setaria italica	73.10	0.00e+00	625.00
IUUC-Sly-111786	Solanum lycopersicum	41.71	1.00e-82	299.00
IUUC-Sbi-114102	Sorghum bicolor	73.81	0.00e+00	634.00
IUUC-Tca-121562	Theobroma cacao	45.02	4.00e-88	317.00
IUUC-Tae-123446	Triticum aestivum	69.48	2.00e-174	604.00
IUUC-Tur-126707	Triticum urartu	58.46	3.00e-139	487.00
IUUC-Vvi-131441	Vitis vinifera	45.67	3.00e-96	344.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence