iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099699

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_898764; POPTR_0014s08290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s08290	POPTR_0014s08290.1	POPTR_0014s08290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-09	38.4	140	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++  +++ ++++C H+fh++C+  w        ++++CP+C+
   Q: 140  CPICLEEYdlENPKHITNCEHHFHLSCILEW------MERSDTCPICD 181
           ******887789899****************......**********5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGCCCSSRK PHLHGTPVYY YCPPALEEHG SLTSHNGAAS AFTAGLLVEL HLNTSTPDTF 60
RPPPAPLPYD VILGCPQSPF SESVQETISR GSFGTLATCE DLDELDCETQ ASSLLVSPRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTTGCCGT AATCTTTCTG AGATACCCAT TAATTAACTA GGCTAAAAGG GACGAGTCGA 60
CTCAGACCCA GACTCAATTG GATAAATGAG TGGAATGCAA CAACAGAACA AAGTATAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0014s08290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006135	Arabidopsis lyrata	60.75	2.00e-61	228.00
IUUC-Ath-007231	Arabidopsis thaliana	60.75	1.00e-60	225.00
IUUC-Bdi-014710	Brachypodium distachyon	46.28	2.00e-39	154.00
IUUC-Gma-042911	Glycine max	68.25	4.00e-73	266.00
IUUC-Hvu-047682	Hordeum vulgare	44.81	2.00e-37	147.00
IUUC-Mtr-058420	Medicago truncatula	65.24	4.00e-70	256.00
IUUC-Oba-075793	Oryza barthii	48.19	7.00e-34	136.00
IUUC-Obr-076796	Oryza brachyantha	45.74	2.00e-39	154.00
IUUC-Ogl-077416	Oryza glaberrima	46.29	7.00e-35	139.00
IUUC-Ogu-078163	Oryza glumaepatula	48.19	7.00e-34	136.00
IUUC-Oin-079978	Oryza indica	47.06	4.00e-34	136.00
IUUC-Ome-081206	Oryza meridionalis	47.06	6.00e-34	135.00
IUUC-Oni-082498	Oryza nivara	48.19	7.00e-34	136.00
IUUC-Oru-084462	Oryza rufipogon	48.19	7.00e-34	136.00
IUUC-Osa-085799	Oryza sativa	47.06	4.00e-34	136.00
IUUC-Ppe-101156	Prunus persica	66.13	4.00e-58	216.00
IUUC-Sit-110172	Setaria italica	45.06	1.00e-33	135.00
IUUC-Sly-111641	Solanum lycopersicum	54.50	1.00e-54	204.00
IUUC-Stu-112073	Solanum tuberosum	52.15	2.00e-43	168.00
IUUC-Sbi-114500	Sorghum bicolor	48.09	1.00e-38	151.00
IUUC-Tca-121829	Theobroma cacao	79.37	4.00e-78	283.00
IUUC-Tae-124908	Triticum aestivum	43.32	5.00e-37	146.00
IUUC-Vvi-131278	Vitis vinifera	67.72	1.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence