iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109984

Ensembl Protein ID

Si032533m

UniProt Accession

K4A0Z2; K4A0Z2_SETIT

Genbank Protein ID

KQL25621.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003529

Gene Name

LOC101753760; SETIT_032533mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si032533m.g	Si032533m	Si032533m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-22	78.8	177	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceen 72
           +++f+CpI++++MrdPvv+++G+ y+r +I++w+++++       cP+t+q+++  dl P l+lr  i++w ++ 
   Q: 177  LSAFVCPITMQVMRDPVVIETGHAYERDAIARWFSECRDlsrapCCPITMQEVRRADLRPVLALRVAIEEWADRL 251
           689*******************************9999999999***************************9875 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MQDDDDSVIS RTTGKLRDGR MFAVIHARNC VKKYYNARGS RAVHITVCPV AGLVFTVRLP 60
RGRGPPPSAS QQLAPAHVSL RASVRRHRRD PPADLSVRAA ALVNQPHSRF NSSLNYAKHN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAGACG ATGATGACTC GGTAATTTCG CGTACGACCG GTAAATTGCG AGACGGGCGA 60
ATGTTCGCCG TGATCCACGC ACGAAACTGT GTAAAAAAAT ATTACAACGC GCGTGGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051058	Leersia perrieri	71.98	0.00e+00	1056.00
IUUC-Oba-075503	Oryza barthii	72.52	0.00e+00	1123.00
IUUC-Obr-076656	Oryza brachyantha	73.38	0.00e+00	1086.00
IUUC-Ogl-077673	Oryza glaberrima	74.53	0.00e+00	1114.00
IUUC-Ogu-078148	Oryza glumaepatula	72.64	0.00e+00	1124.00
IUUC-Oin-080038	Oryza indica	74.66	0.00e+00	1115.00
IUUC-Olo-080957	Oryza longistaminata	70.66	0.00e+00	1112.00
IUUC-Ome-081569	Oryza meridionalis	72.67	0.00e+00	1124.00
IUUC-Oni-082401	Oryza nivara	72.52	0.00e+00	1120.00
IUUC-Opu-083886	Oryza punctata	71.91	0.00e+00	1060.00
IUUC-Oru-084768	Oryza rufipogon	72.64	0.00e+00	1123.00
IUUC-Osa-085588	Oryza sativa	74.66	0.00e+00	1115.00
IUUC-Sbi-113783	Sorghum bicolor	76.49	0.00e+00	806.00
IUUC-Ttr-128602	Tursiops truncatus	38.75	5.00e-07	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence