iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121654

Ensembl Protein ID

EOX98422

UniProt Accession

A0A061E1A5; A0A061E1A5_THECC

Genbank Protein ID

EOX98422.1

Protein Name

RING/U-box superfamily protein, putative isoform 1

Genbank Nucleotide ID

CM001880

Gene Name

TCM_007187

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_007187	EOX98424	EOX98424
TCM_007187	EOX98422	EOX98422
TCM_007187	EOX98423	EOX98423

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.60e-08	33.9	230	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f  +d +  lpCgH fh+ Cl  w       ++   CP+Cr
   Q: 230  CSICLESFgdDDVLTRLPCGHRFHLACLDPW------VRTCGDCPYCR 271
           ********7544344599*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTSASELFYT RRSRVGRPDS DPMIGSSIDR NYNRRHHLGH HNHRHDVDGC DHLRRSPHVR 60
QFSSRASSQS ERSYMRFDQG TSPFVLSNAL NADAVSSSSR PSLTSNERLP GAVLLARARL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACGCATTT TCTCTCGCGT TTCTTCGAAG GTTTGCAGCG GCTTCGCATC TTTTTCTTTT 60
TCTTAATTCT GAATATAATT GGAAAACATT TCTAATTATT TTTCTAAAGA GGAAACTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003023	Amborella trichopoda	38.41	1.00e-29	122.00
IUUC-Aca-005377	Anolis carolinensis	38.10	5.00e-16	79.00
IUUC-Aly-006173	Arabidopsis lyrata	45.55	1.00e-32	132.00
IUUC-Bdi-014868	Brachypodium distachyon	43.79	1.00e-29	122.00
IUUC-Bol-015528	Brassica oleracea	43.17	1.00e-31	129.00
IUUC-Bra-016749	Brassica rapa	43.68	1.00e-30	125.00
IUUC-Cpo-022394	Cavia porcellus	38.10	8.00e-16	77.80
IUUC-Dre-027894	Danio rerio	37.14	3.00e-15	76.30
IUUC-Dse-031567	Dothistroma septosporum	42.31	8.00e-11	59.30
IUUC-Gac-042220	Gasterosteus aculeatus	36.05	1.00e-14	73.90
IUUC-Hvu-047572	Hordeum vulgare	45.03	8.00e-32	129.00
IUUC-Mtr-058054	Medicago truncatula	43.27	1.00e-36	145.00
IUUC-Mac-064949	Musa acuminata	46.29	1.00e-26	112.00
IUUC-Oba-075741	Oryza barthii	43.20	5.00e-30	122.00
IUUC-Obr-076821	Oryza brachyantha	42.60	2.00e-29	121.00
IUUC-Ogl-077510	Oryza glaberrima	43.20	7.00e-30	123.00
IUUC-Ogu-078106	Oryza glumaepatula	32.42	2.00e-15	75.90
IUUC-Oin-080050	Oryza indica	42.60	2.00e-29	122.00
IUUC-Olo-080497	Oryza longistaminata	41.42	2.00e-24	104.00
IUUC-Ome-081477	Oryza meridionalis	43.20	6.00e-30	123.00
IUUC-Oni-083119	Oryza nivara	42.60	2.00e-29	122.00
IUUC-Opu-083882	Oryza punctata	35.00	3.00e-15	74.70
IUUC-Oru-085121	Oryza rufipogon	32.42	1.00e-15	75.90
IUUC-Osa-086007	Oryza sativa	43.20	7.00e-30	123.00
IUUC-Pop-099358	Populus trichocarpa	60.99	5.00e-65	240.00
IUUC-Pca-100263	Procavia capensis	38.10	1.00e-16	80.90
IUUC-Ppe-101691	Prunus persica	50.90	7.00e-47	179.00
IUUC-Sha-106792	Sarcophilus harrisii	38.10	2.00e-16	80.10
IUUC-Sit-110752	Setaria italica	41.76	7.00e-27	113.00
IUUC-Sbi-114507	Sorghum bicolor	42.60	4.00e-29	120.00
IUUC-Tae-123420	Triticum aestivum	42.44	2.00e-27	115.00
IUUC-Vvi-131679	Vitis vinifera	51.77	8.00e-53	199.00
IUUC-Yli-134448	Yarrowia lipolytica	36.78	4.00e-10	57.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence