iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114851

UUCD1 version

UUC-SoB-01246

Ensembl Protein ID

Sb08g020020.1

UniProt Accession

A0A1B6PDX8; A0A1B6PDX8_SORBI

Genbank Protein ID

KXG23866.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G150400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g020020	Sb08g020020.1	Sb08g020020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-27	94.9	347	389

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...........sd.tllvsGsdDgtikvWDlr 31
           gHt++v c+a            +  + + sGs Dg++kvW+++
   Q: 347  GHTGPVKCVAMdqevdeddadgPRrWVVYSGSLDGSVKVWRVS 389
           8***********999998886644567**************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSPRSGPADD ATSRRRTGLL GSLVKEGGGH VYSLAAAGDL LYTGTDSRNV RVWRDRRELG 60
GGFKSGSGLV KAIVVVAADG GRIYTGHQDG KVRVWRRRAS SSEKKGEEDD PAVEHQRVGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCCGC GCAGCGGCCC GGCGGACGAC GCGACCAGCA GGCGGCGGAC GGGGCTCCTC 60
GGCTCGCTCG TCAAGGAAGG CGGCGGCCAC GTCTACTCGC TCGCCGCGGC GGGGGACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050766	Leersia perrieri	65.20	5.00e-117	413.00
IUUC-Ogl-076982	Oryza glaberrima	71.96	7.00e-122	429.00
IUUC-Ogu-078704	Oryza glumaepatula	71.96	1.00e-121	429.00
IUUC-Oin-079483	Oryza indica	71.57	5.00e-121	427.00
IUUC-Oni-082939	Oryza nivara	71.32	3.00e-121	427.00
IUUC-Opu-083126	Oryza punctata	70.72	4.00e-120	424.00
IUUC-Oru-084259	Oryza rufipogon	71.81	1.00e-121	429.00
IUUC-Osa-085894	Oryza sativa	71.57	4.00e-122	431.00
IUUC-Ppa-095534	Physcomitrella patens	34.67	1.00e-60	226.00
IUUC-Sit-109851	Setaria italica	77.21	2.00e-133	468.00
IUUC-Tae-125175	Triticum aestivum	70.10	6.00e-128	449.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence