iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014020

Ensembl Protein ID

BRADI4G02580.1

UniProt Accession

I1IGR6; I1IGR6_BRADI

Genbank Protein ID

KQJ85958.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100824337; BRADI_4g02580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G02580	BRADI4G02580.1	BRADI4G02580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	4.10e-16	59.5	107	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrtlt............elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
            vkvs++g+++++++dl+ + ++++L++a++++             +++  ++a++YeD+dGDl+ l++D+++++++s       ++rl+i+k
   Q: 107  YVKVSMDGAPYLRKIDLKMYKGYRELREALEAMFlscfssgsgdaaAVNPADFAVTYEDKDGDLM-LVGDVPFQMFMS------TCKRLRIMK 192
           69******************************444578899999989999***************.************......9******98 PP

Organism

Brachypodium distachyon

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MASAALENLK ATELRLGLPG VEDDSPAPAT PRGSKRGIAD NKEEEAKTVT AAPAAKAQVV 60
GWPPVRSYRK SCFQQQSKSK PAAEAPAPEK EEAAEAPPPV AGSGSLYVKV SMDGAPYLRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACAAACAG AAAGCTCTCA CCTTCCTTAA GCCAGCTGAG AAAGATCAAG AGACTCTCAT 60
ATCTCATCTC CTTGTTGCTG CAAAGTTCTT GCAAAAGTTG CAACTTGCAA CCACCGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

bdi:100824337

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	57.62	8.00e-53	199.00
IUUC-Aly-006269	Arabidopsis lyrata	52.74	4.00e-47	179.00
IUUC-Ath-007370	Arabidopsis thaliana	49.50	9.00e-46	176.00
IUUC-Bra-016684	Brassica rapa	49.49	1.00e-45	174.00
IUUC-Gma-043214	Glycine max	49.26	2.00e-47	181.00
IUUC-Hvu-047853	Hordeum vulgare	68.90	8.00e-65	238.00
IUUC-Lpe-051475	Leersia perrieri	57.92	2.00e-51	194.00
IUUC-Mtr-058771	Medicago truncatula	46.33	1.00e-43	168.00
IUUC-Mac-065397	Musa acuminata	54.40	3.00e-49	186.00
IUUC-Oba-075141	Oryza barthii	68.84	2.00e-66	243.00
IUUC-Obr-076144	Oryza brachyantha	64.56	2.00e-59	220.00
IUUC-Ogl-077720	Oryza glaberrima	58.60	3.00e-56	210.00
IUUC-Ogu-078093	Oryza glumaepatula	68.84	9.00e-66	241.00
IUUC-Oin-079780	Oryza indica	68.84	2.00e-63	233.00
IUUC-Oni-083078	Oryza nivara	68.84	2.00e-63	233.00
IUUC-Opu-083449	Oryza punctata	58.90	1.00e-51	196.00
IUUC-Oru-084991	Oryza rufipogon	68.84	2.00e-63	233.00
IUUC-Osa-085321	Oryza sativa	68.84	2.00e-63	233.00
IUUC-Pop-099361	Populus trichocarpa	51.16	2.00e-47	180.00
IUUC-Sit-109841	Setaria italica	70.20	5.00e-67	246.00
IUUC-Sly-110939	Solanum lycopersicum	49.76	2.00e-46	177.00
IUUC-Stu-112636	Solanum tuberosum	48.97	4.00e-45	172.00
IUUC-Sbi-114296	Sorghum bicolor	60.78	5.00e-57	213.00
IUUC-Tca-121122	Theobroma cacao	53.47	1.00e-47	181.00
IUUC-Tae-123807	Triticum aestivum	68.75	5.00e-66	243.00
IUUC-Tur-126832	Triticum urartu	48.19	4.00e-36	143.00
IUUC-Vvi-131595	Vitis vinifera	53.11	8.00e-48	182.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence