iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111462

Ensembl Protein ID

Solyc09g065850.2.1

UniProt Accession

G9HPV4; G9HPV4_SOLLC

Genbank Protein ID

AEX00349.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379433

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g065850.2	Solyc09g065850.2.1	Solyc09g065850.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.90e-20	72.0	90	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + +kvs++g+++++++dl+++ ++++Llka+++ ++          ++++s++a++YeD+dGD++ l++D+++++++s      s++rl+i
   Q: 90   MYLKVSMDGAPYLRKIDLQVYKSYQELLKALQSmFKctigvysereGYNGSDYAPTYEDKDGDWM-LVGDVPWEMFIS------SCKRLRI 173
           569******************************7336799999999*******************.************......******9 PP
   S: 82   qk 83
            k
   Q: 174  IK 175
           97 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MRIYEKDIND LEATELRLGL PGIINDESST STSTSKNSRK RPSSSSVNEN EQQDSAPAPK 60
AQVVGWPPVR SYRKNHVSKL SESDNNSSGM YLKVSMDGAP YLRKIDLQVY KSYQELLKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGTTTAC CTGGCTGCAA GCAAGCGCGT ATTGACAACG AATCGTAGGC GAGTTGTTTT 60
CTCCGTGTTA TTATTTATGA GATTCATGCA CACACAAAGA ATAACTCGCC TACATATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:543540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013911	Botrytis cinerea	28.21	1.20e+00	26.60
IUUC-Lma-053271	Leptosphaeria maculans	31.15	7.70e-01	28.10
IUUC-Mla-059044	Melampsora laricipopulina	33.33	5.80e-01	29.60
IUUC-Nfi-068542	Neosartorya fischeri	29.51	2.70e+00	25.40
IUUC-Oba-075141	Oryza barthii	49.49	8.00e-47	179.00
IUUC-Oin-079780	Oryza indica	48.72	3.00e-44	170.00
IUUC-Oni-083078	Oryza nivara	48.72	3.00e-44	170.00
IUUC-Oru-084991	Oryza rufipogon	48.72	3.00e-44	170.00
IUUC-Osa-085321	Oryza sativa	48.72	3.00e-44	170.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence