iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076913

Ensembl Protein ID

OB01G15490.1

UniProt Accession

J3KX43; J3KX43_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G15490	OB01G15490.1	OB01G15490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-18	66.9	247	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlr 31
             ++a+  +  llvs+s D ++kvWD++
   Q: 247  LLSVAWhkP-SLLVSCSKDSKVKVWDTK 273
           5789**875.79**************76 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAAPPGRVLV DLDGDVLANC ARFLGARDVA SLAMACRPLR AAAYCDAVWY RLFRERWPFQ 60
HLPRGALGLR ELYIHRHTEV HQMKFADPIS AIYYPNPAVV TPSHLMLDRN YIWLSQGPMA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCGC CGCCGGGGCG GGTGCTCGTC GACCTCGACG GCGACGTGCT GGCCAACTGC 60
GCCCGGTTCC TCGGCGCCCG CGACGTGGCC AGCCTCGCCA TGGCCTGCCG CCCCCTCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	45.19	2.00e-92	332.00
IUUC-Bdi-014621	Brachypodium distachyon	77.82	0.00e+00	711.00
IUUC-Gma-043867	Glycine max	43.56	2.00e-100	358.00
IUUC-Hvu-047817	Hordeum vulgare	76.25	0.00e+00	731.00
IUUC-Lpe-051161	Leersia perrieri	88.48	0.00e+00	827.00
IUUC-Mtr-057899	Medicago truncatula	46.15	3.00e-73	268.00
IUUC-Mac-065373	Musa acuminata	55.05	1.00e-114	405.00
IUUC-Oba-075705	Oryza barthii	87.21	0.00e+00	838.00
IUUC-Ogl-077871	Oryza glaberrima	87.42	0.00e+00	839.00
IUUC-Ogu-078128	Oryza glumaepatula	87.42	0.00e+00	842.00
IUUC-Oin-079947	Oryza indica	87.42	0.00e+00	840.00
IUUC-Olo-080246	Oryza longistaminata	86.68	0.00e+00	681.00
IUUC-Ome-081308	Oryza meridionalis	87.71	0.00e+00	852.00
IUUC-Oni-082542	Oryza nivara	87.63	0.00e+00	842.00
IUUC-Opu-083600	Oryza punctata	87.63	0.00e+00	831.00
IUUC-Oru-084880	Oryza rufipogon	87.42	0.00e+00	842.00
IUUC-Osa-085335	Oryza sativa	88.86	0.00e+00	684.00
IUUC-Ppa-095334	Physcomitrella patens	41.29	5.00e-75	274.00
IUUC-Pop-099428	Populus trichocarpa	51.54	9.00e-84	302.00
IUUC-Ppe-101795	Prunus persica	49.45	2.00e-91	328.00
IUUC-Smo-108689	Selaginella moellendorffii	36.76	2.00e-57	216.00
IUUC-Sit-110574	Setaria italica	76.81	0.00e+00	674.00
IUUC-Sly-111776	Solanum lycopersicum	40.99	7.00e-84	303.00
IUUC-Stu-112081	Solanum tuberosum	45.55	1.00e-52	198.00
IUUC-Sbi-114123	Sorghum bicolor	74.69	0.00e+00	719.00
IUUC-Tca-120973	Theobroma cacao	46.14	8.00e-114	402.00
IUUC-Tae-124174	Triticum aestivum	77.29	0.00e+00	729.00
IUUC-Vvi-131356	Vitis vinifera	46.79	4.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence