iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101249

Ensembl Protein ID

EMJ05876

UniProt Accession

M5VXQ3; M5VXQ3_PRUPE

Genbank Protein ID

EMJ05876.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KB639097

Gene Name

PRUPE_ppa000309mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa000309mg	EMJ05876	EMJ05876

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-09	37.1	1100	1130
E3 activity/RING/U-box	5.60e-27	94.1	400	472

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           Ht  vt+la   s+ +l sGs D t +vW++
   Q: 1100 HTKAVTSLAIlqSGETLYSGSLDRTTRVWSI 1130
           999******9966699*************95 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +l+ dPv+l++G+ty+r++I++w+++g++tcP+trq l++++l + n++l+rli +w e+n 
   Q: 400  PPKDFVCPITSTLFDDPVTLETGQTYERKAIQEWIERGNSTCPITRQNLQSTQLpKTNYVLKRLIASWQEQNP 472
           79******************************************************************99985 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MTTTTSSSQI LRHTAAFVSE TLSQPELRRH LFSTLRRKFP SSTSQAALNP LNLAAETLEN 60
TISSTSPAIR ASSLSLSEKL LLKNPLNPFS SLLLSLIYGL YRRPIEAALS LLDIFHTDPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCACCA CCACCTCCTC CTCCCAAATT CTCCGCCACA CCGCCGCATT TGTATCCGAA 60
ACACTCTCCC AACCCGAGCT CCGCCGCCAC CTATTCTCCA CTCTCCGCCG CAAATTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pper:PRUPE_ppa000309mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	52.59	0.00e+00	898.00
IUUC-Atr-002936	Amborella trichopoda	46.81	0.00e+00	1095.00
IUUC-Bdi-014680	Brachypodium distachyon	52.55	0.00e+00	919.00
IUUC-Gma-044256	Glycine max	59.48	0.00e+00	1400.00
IUUC-Hvu-047711	Hordeum vulgare	52.91	6.00e-102	363.00
IUUC-Lpe-051224	Leersia perrieri	46.34	0.00e+00	807.00
IUUC-Mtr-058452	Medicago truncatula	59.60	0.00e+00	1316.00
IUUC-Mac-064685	Musa acuminata	58.86	0.00e+00	1024.00
IUUC-Obr-076347	Oryza brachyantha	53.18	0.00e+00	887.00
IUUC-Ogl-077695	Oryza glaberrima	53.12	0.00e+00	797.00
IUUC-Ogu-078873	Oryza glumaepatula	52.94	0.00e+00	823.00
IUUC-Oin-079745	Oryza indica	53.44	4.00e-133	468.00
IUUC-Olo-081050	Oryza longistaminata	49.49	6.00e-124	437.00
IUUC-Ome-081604	Oryza meridionalis	47.10	0.00e+00	840.00
IUUC-Oni-082155	Oryza nivara	52.79	0.00e+00	799.00
IUUC-Opu-083775	Oryza punctata	56.09	3.00e-123	435.00
IUUC-Oru-084628	Oryza rufipogon	50.49	0.00e+00	784.00
IUUC-Osa-086224	Oryza sativa	54.20	1.00e-88	319.00
IUUC-Pop-099122	Populus trichocarpa	68.98	0.00e+00	1057.00
IUUC-Sit-110152	Setaria italica	54.24	0.00e+00	930.00
IUUC-Sly-111919	Solanum lycopersicum	62.12	0.00e+00	1134.00
IUUC-Stu-111946	Solanum tuberosum	57.58	0.00e+00	1368.00
IUUC-Sbi-114464	Sorghum bicolor	50.63	0.00e+00	901.00
IUUC-Tca-121369	Theobroma cacao	66.64	0.00e+00	1585.00
IUUC-Tae-123295	Triticum aestivum	53.41	0.00e+00	912.00
IUUC-Tur-126163	Triticum urartu	52.08	0.00e+00	725.00
IUUC-Vvi-131144	Vitis vinifera	69.91	0.00e+00	1467.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence