iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080923

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539068.1_FG013	KN539068.1_FGT013	KN539068.1_FGP013

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	1.20e-121	408.1	233	587

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 231  liakhlesll....aelvallrdkktedlsrmykLlsrvlngleellkeleshikeqgkaalt.aeekek..............dpkkyVer 303
           li k +e++l    ++++ ll d+ktedl+rm++L+sr+++gl ++ k +++h+  +g  +l  a+ +++              + +++V++
   Q: 233  LIDKRAEEILnkenSGCKVLLCDEKTEDLARMFRLFSRITDGLLPVSKIFKEHVIAEGMSLLKhATDAANsrkdekkgvvvglpE-QDFVRS 323
           666677777777779***********************************************974444446677899*****953.78**** PP
   S: 304  llelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks.skglteeeleaqldkvllvfkyisekdvFek 394
           ++el++k+   v ++F+ +  F kal++afe f nk   +  + s+El+A y+D+ L+++ s +l +e +++ l+kv+ ++ y+s+kd+F +
   Q: 324  VIELHDKYMAYVTNCFQSNSVFHKALKEAFEVFCNKD--VVGCSSAELFAAYCDSILKRGgSEKLSDEAIDESLEKVVKLLTYLSDKDLFVE 413
           *************************************..56699****************9******************************* PP
   S: 395  yYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrqFkeekentees.esvelsvlvLsagaWptasetekv 485
           +++k L +RLl +k   +e E+ +++kLk+ +g +ftsk+e+M++d+ + ++ +  F+e  +n+ es + ++l+v vL++g+Wpt+ + +++
   Q: 414  FHRKKLGRRLLFDKNTNDEHERILLSKLKQFFGGQFTSKMEGMLKDITLAKEHQSSFEEYVSNNPESnPLIDLNVTVLTTGYWPTYKN-SDI 504
           **********************************************************987766555399****************66.66* PP
   S: 486  sLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpeeeL 568
           +LP e+ k +e f+e+Y + +++RkL+W  +lg++ +  ++++++ e+   t+Q+a+LL+fn+ +k+s+ ++  + +l++++ 
   Q: 505  NLPLEMVKCVEVFKEYYRSDKQHRKLTWIFSLGNCVVIGNFDAKPVEFVLNTYQAALLLLFNEADKLSYSDIVSQLKLSDDDA 587
           ******************************************************************************99875 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MNMSPRIPVV DLEDGWRDVL AGVAKLKCIL DGSNVVHFVP DEYMHLYTTV YNMCTQKPPN 60
DYSQVLYDRY KQALDDHIES VVLPSLNEKH GEFLLREIVQ RWEKHKLMVR WLRRFFDYLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATATGT CGCCGCGCAT TCCGGTGGTG GACCTCGAGG ACGGGTGGCG CGACGTGCTC 60
GCCGGCGTCG CCAAGCTCAA GTGCATCCTC GATGGCTCCA ACGTCGTTCA CTTCGTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075549	Oryza barthii	89.95	0.00e+00	1316.00
IUUC-Ogl-077526	Oryza glaberrima	89.68	0.00e+00	1310.00
IUUC-Ogu-078725	Oryza glumaepatula	89.95	0.00e+00	1316.00
IUUC-Oin-079233	Oryza indica	90.83	0.00e+00	1283.00
IUUC-Ome-081179	Oryza meridionalis	89.41	0.00e+00	1308.00
IUUC-Oni-082264	Oryza nivara	89.81	0.00e+00	1313.00
IUUC-Opu-084006	Oryza punctata	86.86	0.00e+00	1303.00
IUUC-Oru-085048	Oryza rufipogon	89.95	0.00e+00	1315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence