iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113768

UUCD1 version

UUC-SoB-00628

Ensembl Protein ID

Sb03g025110.1

UniProt Accession

A0A1B6Q475; A0A1B6Q475_SORBI

Genbank Protein ID

KXG32703.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G186000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g025110	Sb03g025110.1	Sb03g025110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-09	37.1	87	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H +svt + +  ++ +l+++Gs Dg +k+WD
   Q: 87   HLGSVTKV-LtiPNtCLFLTGSKDGDVKLWD 116
           99999**8.446666**************** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MCHEGGARSI SVFDSDRGCG SISPLVVTGG KNGDIALHDC RFLSTGKSKH HRITTEHGVK 60
ASSMHDIKSS TFGGTNSGMV WHIPKAHLGS VTKVLTIPNT CLFLTGSKDG DVKLWDAKNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCCATG AAGGTAAGTC CTGAGCGTGA GCAATGCTTA ATTGTTTACT GTTTGACTAT 60
TGAGAATAAA TAATCATTAT TCTTGAATAA GCAATGTAAT ATGATTAGTA CAGGATAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	63.33	8.00e-57	211.00
IUUC-Atr-002754	Amborella trichopoda	64.80	2.00e-66	246.00
IUUC-Aly-006404	Arabidopsis lyrata	64.97	1.00e-64	242.00
IUUC-Ath-006612	Arabidopsis thaliana	65.54	3.00e-64	240.00
IUUC-Bdi-014471	Brachypodium distachyon	76.09	6.00e-78	284.00
IUUC-Bol-016375	Brassica oleracea	65.54	3.00e-65	244.00
IUUC-Bra-016630	Brassica rapa	64.41	1.00e-64	242.00
IUUC-Gma-044099	Glycine max	62.36	6.00e-65	243.00
IUUC-Hvu-047213	Hordeum vulgare	71.75	2.00e-71	261.00
IUUC-Lpe-051382	Leersia perrieri	79.21	4.00e-79	290.00
IUUC-Mtr-058725	Medicago truncatula	63.07	6.00e-64	239.00
IUUC-Mac-065224	Musa acuminata	70.22	2.00e-71	265.00
IUUC-Oan-073395	Ornithorhynchus anatinus	29.03	1.00e-06	44.30
IUUC-Oba-075826	Oryza barthii	80.00	6.00e-82	299.00
IUUC-Obr-076145	Oryza brachyantha	81.01	1.00e-81	298.00
IUUC-Ogu-078307	Oryza glumaepatula	81.36	5.00e-81	296.00
IUUC-Oin-080118	Oryza indica	80.23	1.00e-78	288.00
IUUC-Olo-080848	Oryza longistaminata	80.11	1.00e-81	298.00
IUUC-Oni-082792	Oryza nivara	81.36	2.00e-81	297.00
IUUC-Opu-084153	Oryza punctata	80.23	1.00e-79	291.00
IUUC-Oru-084415	Oryza rufipogon	80.56	2.00e-82	300.00
IUUC-Osa-085332	Oryza sativa	80.56	9.00e-83	300.00
IUUC-Ppa-095505	Physcomitrella patens	48.28	8.00e-40	159.00
IUUC-Pop-098812	Populus trichocarpa	64.41	6.00e-65	243.00
IUUC-Ppe-101610	Prunus persica	65.57	7.00e-66	246.00
IUUC-Smo-109573	Selaginella moellendorffii	46.29	6.00e-43	167.00
IUUC-Sit-109981	Setaria italica	84.32	1.00e-83	303.00
IUUC-Sly-110968	Solanum lycopersicum	64.25	9.00e-65	242.00
IUUC-Stu-111939	Solanum tuberosum	64.80	6.00e-66	242.00
IUUC-Tca-121789	Theobroma cacao	63.54	1.00e-66	248.00
IUUC-Tae-125726	Triticum aestivum	74.01	1.00e-73	271.00
IUUC-Tur-126379	Triticum urartu	62.78	2.00e-56	210.00
IUUC-Vvi-131584	Vitis vinifera	63.93	2.00e-65	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence