iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112745

Ensembl Protein ID

PGSC0003DMT400032040

UniProt Accession

M1AWQ8; M1AWQ8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400012295	PGSC0003DMT400032040	PGSC0003DMT400032040
PGSC0003DMG400012295	PGSC0003DMT400032041	PGSC0003DMT400032041

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-12	46.9	316	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           +H ++v+ +++  s+ +l++ + Dg++++W 
   Q: 316  THDSEVWQMEWdmSGMTLATTGSDGVVRLWQ 346
           599********887766899999*******6 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDKAIIKLDE GTTCTAWNYS GHRLAAGSTD GTLSLFDSTD PASSVFNCSS KFKVHESSIV 60
KVVWAPPEYG DVVACICADG RLLLWEEVGE DSELLQWKLC KCFDRISSQV LDVQFGVSQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATAAAG CCATTATTAA GCTTGACGAA GGTACAACAT GCACTGCGTG GAATTATTCG 60
GGTCACAGAT TAGCTGCTGG TTCAACTGAT GGTACTTTGT CCCTTTTTGA TTCTACTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	67.33	8.00e-83	298.00
IUUC-Apl-003654	Anas platyrhynchos	25.55	2.00e-24	105.00
IUUC-Aca-004378	Anolis carolinensis	25.78	3.00e-24	104.00
IUUC-Aly-005963	Arabidopsis lyrata	60.94	5.00e-121	426.00
IUUC-Ath-007107	Arabidopsis thaliana	60.50	2.00e-123	434.00
IUUC-Bdi-014594	Brachypodium distachyon	54.04	3.00e-112	397.00
IUUC-Bol-016565	Brassica oleracea	59.94	2.00e-119	421.00
IUUC-Bra-017831	Brassica rapa	60.83	2.00e-120	424.00
IUUC-Cho-024660	Choloepus hoffmanni	24.92	1.00e-23	102.00
IUUC-Eca-033425	Equus caballus	23.91	9.00e-24	102.00
IUUC-Fal-037234	Ficedula albicollis	26.17	2.00e-23	104.00
IUUC-Gma-044300	Glycine max	64.56	4.00e-128	449.00
IUUC-Hvu-047455	Hordeum vulgare	53.20	4.00e-111	392.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	24.92	4.00e-24	103.00
IUUC-Lpe-051064	Leersia perrieri	53.76	3.00e-113	400.00
IUUC-Meu-055958	Macropus eugenii	25.89	4.00e-15	74.30
IUUC-Mtr-057876	Medicago truncatula	59.84	1.00e-121	428.00
IUUC-Mga-059348	Meleagris gallopavo	25.55	1.00e-24	105.00
IUUC-Mac-064960	Musa acuminata	56.63	1.00e-109	387.00
IUUC-Opr-070773	Ochotona princeps	21.86	9.00e-09	53.50
IUUC-Oan-073098	Ornithorhynchus anatinus	25.23	5.00e-25	107.00
IUUC-Oba-075325	Oryza barthii	48.47	2.00e-91	327.00
IUUC-Obr-076089	Oryza brachyantha	52.37	8.00e-109	385.00
IUUC-Ogl-077279	Oryza glaberrima	52.92	2.00e-109	387.00
IUUC-Ogu-078901	Oryza glumaepatula	48.47	2.00e-91	327.00
IUUC-Oin-079385	Oryza indica	50.00	2.00e-107	380.00
IUUC-Ome-081809	Oryza meridionalis	55.81	1.00e-102	366.00
IUUC-Oni-082185	Oryza nivara	67.34	1.00e-80	291.00
IUUC-Opu-083324	Oryza punctata	50.97	2.00e-105	374.00
IUUC-Oru-084801	Oryza rufipogon	53.20	3.00e-110	390.00
IUUC-Osa-085790	Oryza sativa	52.92	2.00e-109	387.00
IUUC-Psi-093508	Pelodiscus sinensis	25.86	3.00e-25	108.00
IUUC-Ppa-095228	Physcomitrella patens	37.93	1.00e-65	241.00
IUUC-Pop-099015	Populus trichocarpa	62.26	7.00e-130	455.00
IUUC-Ppe-101303	Prunus persica	64.56	1.00e-134	471.00
IUUC-Rno-104895	Rattus norvegicus	26.25	1.00e-26	115.00
IUUC-Sha-106829	Sarcophilus harrisii	25.00	7.00e-25	106.00
IUUC-Smo-109282	Selaginella moellendorffii	39.67	2.00e-68	251.00
IUUC-Sit-110393	Setaria italica	54.60	7.00e-113	399.00
IUUC-Sly-111125	Solanum lycopersicum	87.05	3.00e-175	606.00
IUUC-Sar-113279	Sorex araneus	24.69	1.00e-23	102.00
IUUC-Sbi-114110	Sorghum bicolor	52.92	6.00e-112	395.00
IUUC-Ssc-115589	Sus scrofa	25.08	1.00e-23	102.00
IUUC-Tca-120999	Theobroma cacao	58.71	4.00e-118	417.00
IUUC-Tae-122796	Triticum aestivum	54.32	4.00e-114	403.00
IUUC-Tur-126582	Triticum urartu	54.55	4.00e-100	357.00
IUUC-Tbe-127344	Tupaia belangeri	26.51	2.00e-14	72.40
IUUC-Ttr-128347	Tursiops truncatus	25.55	8.00e-24	103.00
IUUC-Vpa-130656	Vicugna pacos	26.17	8.00e-24	103.00
IUUC-Vvi-131103	Vitis vinifera	66.67	1.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence