iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006131

Ensembl Protein ID

scaffold_303900.1

UniProt Accession

D7L6Z5; D7L6Z5_ARALL

Genbank Protein ID

EFH62294.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348715

Gene Name

FVE; ARALYDRAFT_899930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_303900.1	scaffold_303900.1	scaffold_303900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-28	97.3	336	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++ +c+++  +d +l+++Gs D+t++++D
   Q: 336  HDADLHCVDWnpHDdNLILTGSADNTVRLFD 366
           9999*******9445**************** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MESDEAAAVS PQATTPSGGT GASGPKKRGR KPKSKDYSQT PSSQQQSGGK MKESGKKTQQ 60
TPSVDEKYSQ WKGLVPILYD WLANHNLVWP SLSCRWGPQL EQATYKNRQR LYLSEQTDGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA GAGAGAGAGG AAAATGGAGA GCGACGAAGC AGCAGCAGTG TCTCCTCAAG 60
CAACGACACC GAGCGGAGGA ACCGGAGCTT CTGGGCCGAA GAAGAGAGGT CGGAAACCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0046872--F:metal ion binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

KEGG

aly:ARALYDRAFT_899930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	74.83	0.00e+00	646.00
IUUC-Atr-003045	Amborella trichopoda	80.30	0.00e+00	743.00
IUUC-Ath-007494	Arabidopsis thaliana	98.22	0.00e+00	954.00
IUUC-Bdi-014938	Brachypodium distachyon	76.84	0.00e+00	731.00
IUUC-Bol-015960	Brassica oleracea	91.21	0.00e+00	944.00
IUUC-Bra-017112	Brassica rapa	91.98	0.00e+00	927.00
IUUC-Gma-044151	Glycine max	82.14	0.00e+00	843.00
IUUC-Lpe-051595	Leersia perrieri	69.81	3.00e-178	617.00
IUUC-Mtr-057993	Medicago truncatula	86.58	0.00e+00	822.00
IUUC-Mac-065523	Musa acuminata	81.30	0.00e+00	635.00
IUUC-Oba-075959	Oryza barthii	67.95	3.00e-178	617.00
IUUC-Obr-076021	Oryza brachyantha	75.16	0.00e+00	701.00
IUUC-Ogl-077211	Oryza glaberrima	74.30	0.00e+00	696.00
IUUC-Ogu-078314	Oryza glumaepatula	64.10	7.00e-163	566.00
IUUC-Oin-079269	Oryza indica	75.76	0.00e+00	704.00
IUUC-Olo-080631	Oryza longistaminata	65.02	3.00e-178	617.00
IUUC-Oni-082416	Oryza nivara	69.87	0.00e+00	642.00
IUUC-Opu-083571	Oryza punctata	65.27	7.00e-168	583.00
IUUC-Oru-084902	Oryza rufipogon	69.23	0.00e+00	627.00
IUUC-Osa-085579	Oryza sativa	75.76	0.00e+00	704.00
IUUC-Olu-087795	Ostreococcus lucimarinus	39.82	2.00e-85	308.00
IUUC-Ppa-095350	Physcomitrella patens	63.53	3.00e-177	613.00
IUUC-Pop-099098	Populus trichocarpa	84.78	0.00e+00	810.00
IUUC-Ppe-101724	Prunus persica	85.05	0.00e+00	798.00
IUUC-Sit-110597	Setaria italica	77.68	0.00e+00	716.00
IUUC-Sly-111411	Solanum lycopersicum	78.19	0.00e+00	730.00
IUUC-Stu-112285	Solanum tuberosum	79.71	2.00e-167	580.00
IUUC-Sbi-114341	Sorghum bicolor	77.02	0.00e+00	708.00
IUUC-Tca-121523	Theobroma cacao	87.15	0.00e+00	828.00
IUUC-Tae-125281	Triticum aestivum	74.95	0.00e+00	711.00
IUUC-Tur-126763	Triticum urartu	74.60	0.00e+00	639.00
IUUC-Vvi-131642	Vitis vinifera	80.18	0.00e+00	739.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence