iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131642

Ensembl Protein ID

VIT_09s0002g02150.t01

UniProt Accession

D7U001; D7U001_VITVI

Genbank Protein ID

CBI35947.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g02150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g02150	VIT_09s0002g02150.t01	VIT_09s0002g02150.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-27	94.7	286	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++ +c+++  +d +l+++Gs D+t++++D
   Q: 286  HNADLHCVDWnpHDiNLILTGSADNTVRMFD 316
           999********988***************** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKETSTAGET SISVDERYTQ WKSLVPVLYD WLANHNLVWP SLSCRWGPQL EQATYKNRQR 60
LYLSEQTDGS VPNTLVIANC EVVKPRVAAA EHIAQFNEEA RSPFVKKFKT IIHPGEVNRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCAGTGC GGTGACTGTA AGGCAGAATC AACAGAGTGA GAGAGAGAGA GAGAGATGAA 60
GGAGACGAGC ACAGCCGGCG AGACGTCGAT TTCGGTGGAC GAGAGGTATA CCCAGTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

vvi:100244563

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	75.12	0.00e+00	645.00
IUUC-Atr-003045	Amborella trichopoda	81.45	0.00e+00	731.00
IUUC-Aly-006131	Arabidopsis lyrata	80.18	0.00e+00	775.00
IUUC-Ath-007494	Arabidopsis thaliana	80.40	0.00e+00	778.00
IUUC-Bdi-014938	Brachypodium distachyon	77.78	0.00e+00	735.00
IUUC-Bol-015960	Brassica oleracea	79.56	0.00e+00	769.00
IUUC-Bra-017393	Brassica rapa	80.95	0.00e+00	764.00
IUUC-Gma-042982	Glycine max	81.96	0.00e+00	779.00
IUUC-Hvu-047149	Hordeum vulgare	79.29	2.00e-56	209.00
IUUC-Lpe-051595	Leersia perrieri	71.49	3.00e-180	623.00
IUUC-Mtr-057993	Medicago truncatula	80.67	0.00e+00	766.00
IUUC-Mac-065523	Musa acuminata	78.50	1.00e-179	621.00
IUUC-Oba-075959	Oryza barthii	71.58	0.00e+00	635.00
IUUC-Obr-076021	Oryza brachyantha	77.56	0.00e+00	715.00
IUUC-Ogl-077211	Oryza glaberrima	77.78	0.00e+00	715.00
IUUC-Ogu-078314	Oryza glumaepatula	67.31	1.00e-167	581.00
IUUC-Oin-079269	Oryza indica	79.30	0.00e+00	721.00
IUUC-Olo-080631	Oryza longistaminata	67.85	0.00e+00	630.00
IUUC-Oni-082416	Oryza nivara	73.50	0.00e+00	661.00
IUUC-Opu-083571	Oryza punctata	68.21	1.00e-171	595.00
IUUC-Oru-084902	Oryza rufipogon	72.86	0.00e+00	645.00
IUUC-Osa-085579	Oryza sativa	79.30	0.00e+00	721.00
IUUC-Ppa-095350	Physcomitrella patens	63.76	3.00e-174	603.00
IUUC-Pop-099098	Populus trichocarpa	80.09	0.00e+00	755.00
IUUC-Ppe-101803	Prunus persica	80.73	0.00e+00	753.00
IUUC-Sit-110597	Setaria italica	79.39	0.00e+00	720.00
IUUC-Sly-111411	Solanum lycopersicum	83.62	0.00e+00	766.00
IUUC-Stu-112285	Solanum tuberosum	84.84	6.00e-176	608.00
IUUC-Sbi-114341	Sorghum bicolor	79.74	0.00e+00	719.00
IUUC-Tae-125672	Triticum aestivum	75.85	0.00e+00	715.00
IUUC-Tur-126763	Triticum urartu	74.88	0.00e+00	640.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence