iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014052

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100839085; BRADI_2g55990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G55990	BRADI2G55990.1	BRADI2G55990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-09	38.1	125	167

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl +f   ++ ++vlp C H fha C+ +w       s + +CP+Cr
   Q: 125  CTICLAEFapgER-VRVLPgCSHGFHARCIDRW------LSARPTCPTCR 167
           ********99777.*******************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MERMHARRLL SAAVASTGEQ VATAPTPRSA SAFSSLDATV ITILSLLLCA LVVALLLHAL 60
VRCAFRVTRR ACYGQDEEPP GVVETAAPRA RKKGGKGGAG AAIRALPTMA YSAETELAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAGAGAAC ATCACATCTA CTGCCAAAGA AACAAGAGAA CCATCTCCAC GTTCAGTTGT 60
TAATATATAG ACATGGAACG GATGCACGCC AGGAGGCTTC TGTCGGCGGC GGTGGCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100839085

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047834	Hordeum vulgare	57.89	6.00e-29	120.00
IUUC-Lpe-051434	Leersia perrieri	57.69	2.00e-35	140.00
IUUC-Oba-075464	Oryza barthii	59.04	1.00e-32	132.00
IUUC-Obr-076677	Oryza brachyantha	44.31	3.00e-25	107.00
IUUC-Ogl-077523	Oryza glaberrima	55.61	2.00e-35	140.00
IUUC-Ogu-078799	Oryza glumaepatula	59.64	1.00e-32	132.00
IUUC-Oin-079317	Oryza indica	59.64	1.00e-32	132.00
IUUC-Ome-081209	Oryza meridionalis	62.65	5.00e-35	139.00
IUUC-Oni-082764	Oryza nivara	59.04	2.00e-31	128.00
IUUC-Opu-084140	Oryza punctata	53.27	3.00e-34	137.00
IUUC-Oru-084423	Oryza rufipogon	59.04	3.00e-32	130.00
IUUC-Osa-086260	Oryza sativa	59.04	2.00e-32	130.00
IUUC-Sit-110046	Setaria italica	56.44	1.00e-33	135.00
IUUC-Sbi-114138	Sorghum bicolor	55.11	3.00e-32	130.00
IUUC-Tae-122737	Triticum aestivum	59.14	9.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence