iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G47740	GLYMA02G47740.3	GLYMA02G47740.3
GLYMA02G47740	GLYMA02G47740.4	GLYMA02G47740.4
GLYMA02G47740	GLYMA02G47740.2	GLYMA02G47740.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-28	98.7	243	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           Htdsv +la+      ++l+s++ D+ +k+WD+  g++ 
   Q: 243  HTDSVLGLAWnkeyR-NILASAGADKRVKIWDVVAGKCD 280
           **********96432.89*****************9985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MISAISWVPK GVSKSEPVVA DPPPEEEIQE IIASHTTKSG DSDNEVANND EVVAQALNVA 60
DAVGKASTGS CDEITLALKD LDMDRYDDED EGIEVFSSGI GDLYYPSNDM DPYIKDKNDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGCTAAAG GGAGGGTTCT TCTTCATGTT TTTCTTTTTT CCTTAAAACC CTTTCCTGAG 60
TTGCGTCGTC TCTCACTCAT AAAATGATTT CTGCGATTTC GTGGGTGCCC AAAGGGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001975	Ailuropoda melanoleuca	34.58	5.00e-64	238.00
IUUC-Atr-002719	Amborella trichopoda	60.53	3.00e-122	431.00
IUUC-Aca-005184	Anolis carolinensis	35.68	9.00e-68	251.00
IUUC-Aly-005967	Arabidopsis lyrata	62.90	3.00e-164	571.00
IUUC-Ath-007642	Arabidopsis thaliana	59.17	4.00e-156	544.00
IUUC-Afu-009081	Aspergillus fumigatus	38.03	1.00e-82	300.00
IUUC-Ani-009187	Aspergillus nidulans	38.57	2.00e-77	283.00
IUUC-Ate-010542	Aspergillus terreus	43.97	9.00e-60	224.00
IUUC-Bdi-014598	Brachypodium distachyon	53.06	1.00e-133	469.00
IUUC-Bol-016451	Brassica oleracea	62.08	2.00e-161	561.00
IUUC-Bra-016753	Brassica rapa	63.39	9.00e-161	559.00
IUUC-Cin-025441	Ciona intestinalis	32.40	3.00e-45	176.00
IUUC-Dre-027584	Danio rerio	39.25	1.00e-67	250.00
IUUC-Dno-029634	Dasypus novemcinctus	37.80	3.00e-63	236.00
IUUC-Gga-040402	Gallus gallus	33.88	2.00e-68	253.00
IUUC-Gac-042618	Gasterosteus aculeatus	38.62	1.00e-69	257.00
IUUC-Ggo-044778	Gorilla gorilla	33.33	1.00e-64	240.00
IUUC-Kpa-049194	Komagataella pastoris	29.46	2.00e-52	200.00
IUUC-Lch-049524	Latimeria chalumnae	31.06	6.00e-57	214.00
IUUC-Lpe-050918	Leersia perrieri	53.07	1.00e-127	449.00
IUUC-Loc-051947	Lepisosteus oculatus	35.11	4.00e-70	258.00
IUUC-Laf-053737	Loxodonta africana	35.70	2.00e-65	243.00
IUUC-Meu-056892	Macropus eugenii	35.64	9.00e-45	174.00
IUUC-Mtr-058677	Medicago truncatula	72.37	0.00e+00	678.00
IUUC-Mac-064937	Musa acuminata	62.96	2.00e-152	532.00
IUUC-Nfi-068446	Neosartorya fischeri	37.78	3.00e-81	295.00
IUUC-Opr-070284	Ochotona princeps	33.33	2.00e-49	190.00
IUUC-Ont-071946	Oreochromis niloticus	35.88	2.00e-69	256.00
IUUC-Oba-075486	Oryza barthii	52.16	4.00e-129	454.00
IUUC-Obr-076759	Oryza brachyantha	55.58	4.00e-134	471.00
IUUC-Ogl-076951	Oryza glaberrima	35.60	5.00e-36	146.00
IUUC-Ogu-078324	Oryza glumaepatula	48.35	4.00e-113	401.00
IUUC-Oin-079455	Oryza indica	54.41	2.00e-138	486.00
IUUC-Ome-081585	Oryza meridionalis	50.61	5.00e-118	417.00
IUUC-Oni-082084	Oryza nivara	53.39	6.00e-133	467.00
IUUC-Opu-084114	Oryza punctata	54.45	6.00e-134	470.00
IUUC-Oru-084211	Oryza rufipogon	53.39	6.00e-133	467.00
IUUC-Osa-085974	Oryza sativa	54.41	2.00e-138	486.00
IUUC-Ola-087544	Oryzias latipes	37.09	8.00e-66	244.00
IUUC-Oar-089641	Ovis aries	37.95	8.00e-65	241.00
IUUC-Pfo-097516	Poecilia formosa	35.69	1.00e-73	270.00
IUUC-Pop-099606	Populus trichocarpa	67.01	2.00e-174	605.00
IUUC-Ppe-101910	Prunus persica	65.79	1.00e-172	599.00
IUUC-Sce-106279	Saccharomyces cerevisiae	29.94	5.00e-49	189.00
IUUC-Sja-107920	Schizosaccharomyces japonicus	35.26	1.00e-61	230.00
IUUC-Sit-110604	Setaria italica	55.12	1.00e-140	493.00
IUUC-Sly-111400	Solanum lycopersicum	62.60	5.00e-151	527.00
IUUC-Stu-112208	Solanum tuberosum	49.79	6.00e-107	380.00
IUUC-Sbi-114069	Sorghum bicolor	54.62	1.00e-139	489.00
IUUC-Ssc-115281	Sus scrofa	38.06	1.00e-63	237.00
IUUC-Tgu-117052	Taeniopygia guttata	33.61	9.00e-54	204.00
IUUC-Tru-118113	Takifugu rubripes	36.06	8.00e-72	264.00
IUUC-Tsy-119546	Tarsius syrichta	37.91	3.00e-66	246.00
IUUC-Tni-120562	Tetraodon nigroviridis	36.63	6.00e-74	271.00
IUUC-Tca-121431	Theobroma cacao	66.80	0.00e+00	645.00
IUUC-Xtr-132170	Xenopus tropicalis	37.53	4.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence