iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014551

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100821010; BRADI_3g06000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G06000	BRADI3G06000.1	BRADI3G06000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	8.50e-62	210.0	2	318

Active Site

Position(s)	Description	Evidence
82	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
155	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCat 101
           +w  +e dPg+ft+l+++  +k+  qv+elysLd + l+ + +pv+gl++l+k+ + ++ +r           v +d++ ++ffa+q i+ +Cat
   Q: 2    SWAAVENDPGVFTELLQQMQLKGL-QVDELYSLDLDALKDI-QPVYGLIILYKWRPPEKDER----------PVIKDAVPNLFFANQIINSACAT 84
           79**********************.**************99.9*************998888..........344799***************** PP
   S: 102  yAllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldgl 196
           +Al+svlln +     l ++l +lke+ k   pe k+la+ n + ++++ ns+ar+e ++e++  ++     +++++hf+syv+++g lyeldgl
   Q: 85   QALVSVLLNSSGI--TLSDDLRKLKEFAKDLPPELKGLAIVNCESIRVTSNSFARSEDSEEQKASSK-----DDDVYHFISYVPVDGVLYELDGL 172
           ********98777..8*****************************************9999866644.....589******************** PP
   S: 197  kpfPldlgkk...keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid.................keLlkLlkdies 271
           k  P+ lgk+     +  +   ++ v+   eri+  +++eirf+++ai ++r+ ++   l+ l+                   + +   l ++ +
   Q: 173  KDGPISLGKTpggAGDIGWLRMVQPVI--QERIDQFSQNEIRFSVMAITKNRKEMYIVELKELQRKrenllsqmgdpsvnrqrQSVERSLAEVAA 265
           *********966555667888888888..***********************98887777655555689***********999667777888888 PP
   S: 272  eeekieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklvee 324
           ++e   +++  e+ek kk+k ++irR++ny+ f++ f+k l ++++l+ l e+
   Q: 266  QIEAVTEKIIMEEEKSKKWKTENIRRKHNYVPFLFNFLKILEEKKQLKPLIEK 318
           888888889999************************************99987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSWAAVENDP GVFTELLQQM QLKGLQVDEL YSLDLDALKD IQPVYGLIIL YKWRPPEKDE 60
RPVIKDAVPN LFFANQIINS ACATQALVSV LLNSSGITLS DDLRKLKEFA KDLPPELKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTCGCCC CCTGCGGAGC GCCCCAGCCC CCTCGCTCCG TCGCTCGTCT TCCTCCTCGG 60
GCAAGCGCCG CCACCGGGTC GATCTCTCCT TCGATTCTCT CGCTCCCGGC TGTTTCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bdi:100821010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000878	Aegilops tauschii	85.22	6.00e-153	532.00
IUUC-Aly-006047	Arabidopsis lyrata	63.14	4.00e-115	406.00
IUUC-Oba-075354	Oryza barthii	86.38	8.00e-154	535.00
IUUC-Obr-076886	Oryza brachyantha	86.11	1.00e-145	508.00
IUUC-Ogu-078511	Oryza glumaepatula	85.76	2.00e-153	534.00
IUUC-Olo-080482	Oryza longistaminata	86.38	5.00e-154	536.00
IUUC-Oni-082729	Oryza nivara	85.45	1.00e-151	528.00
IUUC-Opu-084139	Oryza punctata	85.76	4.00e-154	536.00
IUUC-Oru-084441	Oryza rufipogon	86.07	5.00e-154	536.00
IUUC-Osa-085606	Oryza sativa	86.07	6.00e-154	535.00
IUUC-Sit-110523	Setaria italica	86.12	1.00e-153	534.00
IUUC-Sbi-114404	Sorghum bicolor	85.98	2.00e-148	517.00
IUUC-Tae-123169	Triticum aestivum	88.79	9.00e-157	545.00
IUUC-Tur-126366	Triticum urartu	88.44	7.00e-151	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence