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Tag Content
UUCD2 ID IUUC-Osa-085662
Ensembl Protein ID OS02T0234300-01
UniProt Accession Q6EUK7; B7E7M7; Q0E2J5; PUB04_ORYSJ
Genbank Protein ID BAD27662.1; BAF08293.1; EEE56620.1; BAG88374.1
Protein Name U-box domain-containing protein 4; Plant U-box protein 4; RING-type E3 ubiquitin transferase PUB4
Genbank Nucleotide ID AP004030; AP008208; AP014958; AK062592
Gene Name PUB4; Os02g0234300; LOC_Os02g13960; OJ1145_E05.4; OsJ_06003
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OS02G0234300 OS02T0234300-01 OS02T0234300-01
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/U-box U-box 19825583
Classification
Family E-value Score Start End
E3 activity/RING/U-box 1.70e-30 105.8 149 218
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
    +vp+ef CpIsl+lMrdPvv+++G+tydr sI +w+++g++tcP +q+l+++ lvPn +lr+li++wc
   Q: 149 SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCG 218
    59*******************************************************************6 PP
   

Organism Oryza sativa
Functional Description
(View)

Functional Description



     Possesses E3 ubiquitin-protein ligase in vitro.
Possesses E3 ubiquitin-protein ligase in vitro.
Protein Sequence
(Fasta)
LDVLPAASLR LSHDATGLLD LLRAHCRCRA PAQYHDPDEA ALRERLMDAL RQFDLGQPPD 60
HPSLQSLLAD MGISTAASCR AEIDYLEEQI LSQEEDTDLP LVGSVLALLR YCLFAVFDPS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Osa-085662|E3,U-box|Oryza sativa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCCTCGACGT CCTCCCGGCG GCATCACTCC GCCTCTCGCA CGACGCCACC GGCCTGCTCG 60
ACCTCCTCCG CGCCCACTGC CGCTGCCGCG CGCCCGCGCA ATACCATGAC CCCGACGAGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Osa-085662|E3,U-box|Oryza sativa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0016567--P:protein ubiquitination

KEGG osa:4328818
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001129 Aegilops tauschii 84.59 0.00e+00 932.00
IUUC-Aly-006027 Arabidopsis lyrata 48.60 2.00e-133 468.00
IUUC-Ath-007054 Arabidopsis thaliana 48.61 6.00e-133 467.00
IUUC-Bdi-014675 Brachypodium distachyon 81.49 0.00e+00 905.00
IUUC-Bol-015901 Brassica oleracea 50.54 3.00e-137 481.00
IUUC-Bra-017296 Brassica rapa 49.46 1.00e-132 466.00
IUUC-Gma-043020 Glycine max 50.09 3.00e-147 514.00
IUUC-Hvu-047822 Hordeum vulgare 83.70 0.00e+00 952.00
IUUC-Lpe-051105 Leersia perrieri 91.13 0.00e+00 1020.00
IUUC-Mtr-057764 Medicago truncatula 49.48 9.00e-139 486.00
IUUC-Mac-065609 Musa acuminata 50.83 2.00e-141 494.00
IUUC-Oba-075480 Oryza barthii 99.81 0.00e+00 1090.00
IUUC-Obr-076773 Oryza brachyantha 93.05 2.00e-164 570.00
IUUC-Ogl-077156 Oryza glaberrima 99.83 0.00e+00 1172.00
IUUC-Ogu-078640 Oryza glumaepatula 100.00 0.00e+00 1174.00
IUUC-Oin-079253 Oryza indica 96.52 0.00e+00 1121.00
IUUC-Olo-080903 Oryza longistaminata 99.63 0.00e+00 1087.00
IUUC-Ome-081982 Oryza meridionalis 99.30 0.00e+00 1165.00
IUUC-Oni-082824 Oryza nivara 100.00 0.00e+00 1174.00
IUUC-Opu-083758 Oryza punctata 96.52 0.00e+00 1104.00
IUUC-Oru-084718 Oryza rufipogon 100.00 0.00e+00 1174.00
IUUC-Pop-099239 Populus trichocarpa 50.00 6.00e-131 460.00
IUUC-Ppe-101890 Prunus persica 50.77 2.00e-132 465.00
IUUC-Sit-110022 Setaria italica 85.54 0.00e+00 937.00
IUUC-Sly-111463 Solanum lycopersicum 49.57 1.00e-131 462.00
IUUC-Stu-111976 Solanum tuberosum 49.57 1.00e-131 462.00
IUUC-Sbi-114100 Sorghum bicolor 84.32 0.00e+00 934.00
IUUC-Ssc-115592 Sus scrofa 20.45 3.00e-06 45.10
IUUC-Tca-121221 Theobroma cacao 50.26 2.00e-142 498.00
IUUC-Tae-124437 Triticum aestivum 84.22 0.00e+00 955.00
IUUC-Tur-126627 Triticum urartu 86.11 0.00e+00 858.00
IUUC-Vvi-131159 Vitis vinifera 50.09 7.00e-130 456.00
Created Date 25-Jun-2017

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