iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081914

Ensembl Protein ID

OMERI02G16920.1

UniProt Accession

A0A0E0CKN4; A0A0E0CKN4_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI02G16920	OMERI02G16920.1	OMERI02G16920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-15	56.2	183	256

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           +p ++ ++++ e+MrdPv+lpsG+++d+++     +++++    t+++t+++l  +  vPn+ lr++i+awc ++s
   Q: 183  IPIAHDGTLQAEVMRDPVILPSGYSVDQTYQNN--QKQQNpwtnTSTFTDHSLPYSLSVPNHLLRDMISAWCLDHS 256
           7899999************************88..555556899*********76666**************9987 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MDPEAEEAQL RLEMELAKKA KADMSGLQRS SSLDLDHAGL YPLPLPPGWR SAPTSPLRTP 60
SSPPQLQFPP AWAADVAGTS GSAAPEDDGP ARNAGADEAT AGSAPKNEDP ARTAGADDGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGTCTCCC ACCACTCCAC ACTCCACAGA AATGCCACCA CCGCTCGTGT CTGCGGCTCT 60
GCGCTTCCGC CACGGCCTCC GTCGCGTGGG CGCGAGGAGG ATGCAGACGG AGGCGGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000999	Aegilops tauschii	56.67	5.00e-132	463.00
IUUC-Ate-010387	Aspergillus terreus	35.56	1.90e-02	32.00
IUUC-Bgr-012197	Blumeria graminis	26.19	4.10e-02	31.20
IUUC-Bdi-014030	Brachypodium distachyon	58.76	8.00e-124	436.00
IUUC-Hvu-047644	Hordeum vulgare	53.66	6.00e-134	470.00
IUUC-Lpe-051369	Leersia perrieri	71.88	6.00e-175	606.00
IUUC-Oba-075958	Oryza barthii	98.12	0.00e+00	971.00
IUUC-Obr-076540	Oryza brachyantha	68.64	6.00e-180	623.00
IUUC-Ogl-077377	Oryza glaberrima	98.12	0.00e+00	971.00
IUUC-Ogu-078931	Oryza glumaepatula	98.12	0.00e+00	985.00
IUUC-Oin-079164	Oryza indica	97.05	0.00e+00	939.00
IUUC-Olo-080746	Oryza longistaminata	97.91	0.00e+00	951.00
IUUC-Oni-083073	Oryza nivara	97.27	0.00e+00	956.00
IUUC-Opu-084043	Oryza punctata	87.18	0.00e+00	914.00
IUUC-Oru-084550	Oryza rufipogon	97.95	0.00e+00	969.00
IUUC-Osa-086120	Oryza sativa	97.95	0.00e+00	969.00
IUUC-Ola-087227	Oryzias latipes	32.14	2.00e-03	38.10
IUUC-Sit-109753	Setaria italica	50.19	9.00e-117	413.00
IUUC-Sbi-114025	Sorghum bicolor	56.88	8.00e-105	372.00
IUUC-Ssc-116404	Sus scrofa	26.83	1.00e-03	34.70
IUUC-Tae-123917	Triticum aestivum	49.82	7.00e-135	473.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence