iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131012

UUCD1 version

UUC-ViV-00575

Ensembl Protein ID

VIT_08s0105g00180.t01

UniProt Accession

F6H6S4; F6H6S4_VITVI

Genbank Protein ID

CCB47910.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595245

Gene Name

VIT_08s0105g00180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0105g00180	VIT_08s0105g00180.t01	VIT_08s0105g00180.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.40e-34	116.4	5	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedlvPnltlrrliqawceenss 74
           +vp++flCpIsle+M+dPv++++Gitydr+sIekwl sg++ tcP t+q l +++dl+Pn+tlrrliqawc  ++s
   Q: 5    DVPPFFLCPISLEIMKDPVTVSTGITYDRESIEKWLFSGKNnTCPATKQVLsADSDLTPNHTLRRLIQAWCTLHAS 80
           69**********************************999888*********888999**************98865 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEEIDVPPFF LCPISLEIMK DPVTVSTGIT YDRESIEKWL FSGKNNTCPA TKQVLSADSD 60
LTPNHTLRRL IQAWCTLHAS NGVERIPTPK IPINKIQIVK LLNDAKSPQL QMKCIGKLRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGAAGAA ATCGATGTTC CTCCATTTTT CCTCTGCCCG ATTTCTTTGG AGATTATGAA 60
AGATCCGGTG ACGGTGTCAA CGGGTATAAC GTACGATCGG GAGAGCATCG AGAAGTGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100266002

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000941	Aegilops tauschii	47.13	1.00e-93	335.00
IUUC-Bdi-014627	Brachypodium distachyon	48.71	9.00e-99	352.00
IUUC-Hvu-047293	Hordeum vulgare	47.29	3.00e-94	337.00
IUUC-Lpe-051489	Leersia perrieri	44.39	7.00e-81	293.00
IUUC-Oba-075095	Oryza barthii	47.17	1.00e-86	312.00
IUUC-Ogl-077664	Oryza glaberrima	48.05	4.00e-88	317.00
IUUC-Ogu-079030	Oryza glumaepatula	45.27	3.00e-79	287.00
IUUC-Oin-079734	Oryza indica	45.21	6.00e-79	286.00
IUUC-Ome-081839	Oryza meridionalis	48.43	3.00e-95	341.00
IUUC-Oni-082818	Oryza nivara	45.05	9.00e-80	289.00
IUUC-Opu-083355	Oryza punctata	47.82	4.00e-88	317.00
IUUC-Oru-085239	Oryza rufipogon	45.27	3.00e-79	288.00
IUUC-Osa-086041	Oryza sativa	45.27	3.00e-79	287.00
IUUC-Sbi-114243	Sorghum bicolor	46.84	4.00e-97	347.00
IUUC-Tae-124641	Triticum aestivum	47.61	6.00e-100	356.00
IUUC-Tur-126719	Triticum urartu	45.43	3.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence