iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114317

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G281400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031790	Sb04g031790.1	Sb04g031790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.4	110	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +  +d+++ l+ C H+fh+ Cl +w     ++  + +CPlCr
   Q: 110  CAVCLSGIgaRDEVRRLSnCRHAFHRACLDRW----MLAHDQRTCPLCR 154
           ******9999555877666*************....7899********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFPVGYSEM LLPRVLLQVL LLLGHLHRFL LWAFHAVGLG DLIDLGCNYY PPPPPTPTAQ 60
EHQDAAAAAP LQHRRPEFRP VPSVLIEEAL PVVRFDELGG TACGDGDCDC AVCLSGIGAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTTCC CCGTGGGGTA CTCGGAGATG CTGCTCCCGC GCGTGCTGCT GCAGGTGCTC 60
CTCCTCCTCG GCCACCTCCA CCGCTTCCTC CTCTGGGCCT TCCACGCCGT GGGGCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g031790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005489	Arabidopsis lyrata	43.12	2.00e-24	103.00
IUUC-Ath-006792	Arabidopsis thaliana	42.94	1.00e-24	105.00
IUUC-Bdi-014238	Brachypodium distachyon	58.41	5.00e-38	149.00
IUUC-Hvu-047446	Hordeum vulgare	60.53	1.00e-40	158.00
IUUC-Lpe-050791	Leersia perrieri	62.90	2.00e-44	171.00
IUUC-Ogl-077056	Oryza glaberrima	61.57	1.00e-45	174.00
IUUC-Ogu-078300	Oryza glumaepatula	61.57	1.00e-45	174.00
IUUC-Oin-080017	Oryza indica	61.57	1.00e-45	175.00
IUUC-Ome-081373	Oryza meridionalis	61.57	1.00e-45	174.00
IUUC-Oni-083028	Oryza nivara	61.57	1.00e-45	175.00
IUUC-Opu-083418	Oryza punctata	60.87	3.00e-45	174.00
IUUC-Oru-084931	Oryza rufipogon	61.57	1.00e-45	174.00
IUUC-Osa-085848	Oryza sativa	61.57	1.00e-45	174.00
IUUC-Tae-123430	Triticum aestivum	61.33	1.00e-43	168.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence