iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080835

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538872.1_FG002	KN538872.1_FGT002	KN538872.1_FGP002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-08	34.0	326	367

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  +  lpC+H+fh +C+ kw       + +++CPlC+
   Q: 326  CCICLSSYEDGaeLSALPCNHHFHWTCITKW------LRMHATCPLCK 367
           ********88755677***************......**********7 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDPPAKAAAA AVAEAEEEAT VGVQPPLPAR SPGKGTTLLD VYEVEWITRE LERLLVRESG 60
CRGGGGGGRA GGDGRRRRKG TTTKAAAGSY TRPATDKGGF LTELLGRHAV SCLVHVGLVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCAC CGGCGAAGGC GGCGGCGGCG GCGGTGGCGG AGGCGGAGGA GGAGGCAACC 60
GTGGGAGTGC AGCCGCCACT ACCGGCGCGG TCGCCGGGGA AGGGGACGAC GCTGCTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002999	Amborella trichopoda	60.00	6.00e-48	182.00
IUUC-Aly-006309	Arabidopsis lyrata	53.16	2.00e-65	241.00
IUUC-Ath-007135	Arabidopsis thaliana	53.16	7.00e-66	243.00
IUUC-Bdi-014419	Brachypodium distachyon	70.22	2.00e-70	258.00
IUUC-Bra-017089	Brassica rapa	51.87	1.00e-65	242.00
IUUC-Gma-043975	Glycine max	57.99	4.00e-67	247.00
IUUC-Hvu-047330	Hordeum vulgare	77.31	8.00e-75	271.00
IUUC-Lpe-050934	Leersia perrieri	73.63	2.00e-106	377.00
IUUC-Mac-064512	Musa acuminata	69.48	1.00e-67	249.00
IUUC-Oba-075784	Oryza barthii	90.37	3.00e-108	383.00
IUUC-Obr-076831	Oryza brachyantha	85.56	1.00e-104	371.00
IUUC-Ogl-077059	Oryza glaberrima	99.24	1.00e-76	276.00
IUUC-Ogu-077960	Oryza glumaepatula	98.52	6.00e-127	446.00
IUUC-Oin-079107	Oryza indica	94.07	1.00e-124	438.00
IUUC-Ome-081564	Oryza meridionalis	88.89	2.00e-106	378.00
IUUC-Oni-082731	Oryza nivara	98.15	2.00e-126	444.00
IUUC-Opu-083749	Oryza punctata	88.52	2.00e-106	377.00
IUUC-Oru-084835	Oryza rufipogon	98.15	2.00e-126	444.00
IUUC-Osa-086089	Oryza sativa	99.22	1.00e-73	267.00
IUUC-Pop-098913	Populus trichocarpa	58.15	1.00e-58	219.00
IUUC-Ppe-101978	Prunus persica	64.32	2.00e-59	222.00
IUUC-Pgr-103437	Puccinia graminis	33.33	2.00e-09	57.00
IUUC-Sit-110199	Setaria italica	75.56	3.00e-95	340.00
IUUC-Sly-110887	Solanum lycopersicum	52.59	2.00e-67	248.00
IUUC-Stu-112563	Solanum tuberosum	53.16	4.00e-68	250.00
IUUC-Sbi-114428	Sorghum bicolor	70.37	9.00e-85	306.00
IUUC-Tca-121328	Theobroma cacao	57.35	2.00e-61	228.00
IUUC-Tae-123132	Triticum aestivum	69.52	6.00e-76	276.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence