iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3399__AT5G40250.1	fgenesh2_kg.7__3399__AT5G40250.1	fgenesh2_kg.7__3399__AT5G40250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.5	142	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  kd +++lp C H+fh++C+  w       + + +CPlCr
   Q: 142  CAVCLCEFseKDKLRLLPmCSHAFHLNCIDTW------LQSNSTCPLCR 184
           ********88666*******************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSWVRFKIEQ KDGNFAYPPP FYKDPILSPP SPPPPSSGNR ISPAVLFIIV ILAVLFFISG 60
LLHLLVRFLI KHPSATASSR SNRFPEISTS DALQRQLQQL FHLNDSGLDQ AFIDALPVFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGAAGAGA GAGAAAGCAA GAGGAAAGAG AGTTCCTTTA CTCTCTCTTC TTCCTCTGCA 60
AATCTGACAT ATTTGAAAAA ATTAAAAAAG CCCTCTTTGA TTAGGGTTTT GTCTCACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_493966

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000392	Aegilops tauschii	56.87	7.00e-59	219.00
IUUC-Ath-006995	Arabidopsis thaliana	97.07	0.00e+00	677.00
IUUC-Bdi-014382	Brachypodium distachyon	49.82	6.00e-65	240.00
IUUC-Bol-015358	Brassica oleracea	79.16	2.00e-149	521.00
IUUC-Bra-017624	Brassica rapa	82.28	4.00e-146	510.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	53.49	4.00e-13	65.10
IUUC-Gma-043292	Glycine max	58.35	6.00e-80	290.00
IUUC-Hvu-047144	Hordeum vulgare	51.07	1.00e-65	242.00
IUUC-Lpe-051339	Leersia perrieri	48.43	3.00e-69	254.00
IUUC-Mtr-058167	Medicago truncatula	62.76	4.00e-88	317.00
IUUC-Oba-075878	Oryza barthii	50.00	2.00e-70	258.00
IUUC-Obr-076120	Oryza brachyantha	49.52	1.00e-72	266.00
IUUC-Ogl-077906	Oryza glaberrima	50.00	2.00e-70	259.00
IUUC-Ogu-078031	Oryza glumaepatula	50.00	2.00e-70	258.00
IUUC-Oin-080065	Oryza indica	50.18	3.00e-67	248.00
IUUC-Olo-080996	Oryza longistaminata	50.00	2.00e-70	258.00
IUUC-Ome-081784	Oryza meridionalis	50.00	3.00e-70	258.00
IUUC-Oni-082697	Oryza nivara	50.00	2.00e-70	258.00
IUUC-Opu-083782	Oryza punctata	50.16	2.00e-69	255.00
IUUC-Oru-084352	Oryza rufipogon	50.00	2.00e-70	258.00
IUUC-Osa-085627	Oryza sativa	50.00	2.00e-70	258.00
IUUC-Pop-099808	Populus trichocarpa	66.98	8.00e-105	372.00
IUUC-Ppe-101995	Prunus persica	61.24	2.00e-92	331.00
IUUC-Sit-109828	Setaria italica	51.84	3.00e-68	251.00
IUUC-Sly-111152	Solanum lycopersicum	58.46	7.00e-85	306.00
IUUC-Stu-112833	Solanum tuberosum	59.87	4.00e-88	317.00
IUUC-Sbi-114772	Sorghum bicolor	51.71	3.00e-73	268.00
IUUC-Tca-121741	Theobroma cacao	68.11	4.00e-117	413.00
IUUC-Tae-124691	Triticum aestivum	51.09	2.00e-65	241.00
IUUC-Vvi-131093	Vitis vinifera	62.54	2.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence