iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017537

Ensembl Protein ID

Bra022896.1-P

UniProt Accession

M4E296; M4E296_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022896	Bra022896.1	Bra022896.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-28	96.8	920	951
UBD/Beta-Prp	1.10e-43	150.6	874	1008

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H   +t+++f ++ t l+++s D+tik+WD++
   Q: 920  HGHIITDVRFqPNsTQLATSSFDKTIKIWDVS 951
           8889*******777****************85 PP

UBD/Beta-Prp

   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtd 181
           ++++  ++v +++fs +g+ l+s++hd+ + +w++et      + ++h ++++ v+++p++  l+++s D+t+++Wd+ k g  +rt +g h+ 
   Q: 874  SIRRSASKVICCNFSSDGKLLASAGHDKKVFIWNMETLHTEI-PPEEHGHIITDVRFQPNSTQLATSSFDKTIKIWDVsKPGYFVRTISG-HNA 965
           6677889*********************************99.***********************************788999****99.*** PP
   S: 182  svyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtd 223
           +v sl+f++++   + s+++++ +++w++ + +c+r++ + t+
   Q: 966  PVMSLDFHPKKtDLFCSCDTNNEIRFWSINAANCLRAQGASTQ 1008
           *********9955678********************9988765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAQSNWEADK MLDTYIYDHL VKKKLHNIAK SFVTEGKVSP DPVAIDAPGG FLFEWWSVFW 60
EMFYARTKEK HDESVVEYGL NVYIFDYLVK KKLHYTAKLF MTEVKVSPDN VAIDDPRGFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGA GTAATTGGGA AGCTGATAAG ATGTAAGTGA AGCTGAAATT GAATTCTTCG 60
TGGAAAGTTA TAACCTTTTT TAAAAACAAT TTTGTTTCTC ATGTTTTTGT TGGGTGTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	60.66	2.00e-143	503.00
IUUC-Atr-002717	Amborella trichopoda	63.66	3.00e-148	518.00
IUUC-Aly-006471	Arabidopsis lyrata	81.82	0.00e+00	1154.00
IUUC-Ath-007671	Arabidopsis thaliana	79.38	0.00e+00	1141.00
IUUC-Bdi-014855	Brachypodium distachyon	58.07	0.00e+00	853.00
IUUC-Bol-016419	Brassica oleracea	97.04	0.00e+00	1394.00
IUUC-Gma-044008	Glycine max	68.29	0.00e+00	978.00
IUUC-Hvu-047358	Hordeum vulgare	60.96	5.00e-152	530.00
IUUC-Lpe-051527	Leersia perrieri	57.59	0.00e+00	826.00
IUUC-Mtr-058582	Medicago truncatula	70.46	0.00e+00	957.00
IUUC-Mac-064608	Musa acuminata	59.14	0.00e+00	831.00
IUUC-Oba-075243	Oryza barthii	57.05	0.00e+00	816.00
IUUC-Obr-076847	Oryza brachyantha	56.96	0.00e+00	810.00
IUUC-Ogl-076931	Oryza glaberrima	58.88	0.00e+00	868.00
IUUC-Ogu-078758	Oryza glumaepatula	57.34	0.00e+00	824.00
IUUC-Oin-079144	Oryza indica	58.50	0.00e+00	863.00
IUUC-Olo-080947	Oryza longistaminata	55.20	0.00e+00	775.00
IUUC-Ome-081723	Oryza meridionalis	55.64	0.00e+00	801.00
IUUC-Oni-083067	Oryza nivara	58.38	0.00e+00	858.00
IUUC-Opu-083429	Oryza punctata	58.68	0.00e+00	863.00
IUUC-Oru-084213	Oryza rufipogon	56.95	0.00e+00	821.00
IUUC-Osa-085788	Oryza sativa	58.75	0.00e+00	865.00
IUUC-Pop-099951	Populus trichocarpa	68.33	0.00e+00	1011.00
IUUC-Ppe-101896	Prunus persica	67.39	0.00e+00	932.00
IUUC-Sit-110618	Setaria italica	57.98	0.00e+00	847.00
IUUC-Sly-111127	Solanum lycopersicum	58.95	0.00e+00	848.00
IUUC-Stu-112404	Solanum tuberosum	59.64	0.00e+00	852.00
IUUC-Sbi-114046	Sorghum bicolor	59.80	0.00e+00	872.00
IUUC-Tca-121754	Theobroma cacao	68.77	0.00e+00	994.00
IUUC-Tae-125446	Triticum aestivum	57.55	0.00e+00	853.00
IUUC-Tur-126636	Triticum urartu	56.64	0.00e+00	780.00
IUUC-Vvi-130936	Vitis vinifera	61.61	0.00e+00	884.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence