iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006049

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348714

Gene Name

ATCMPG1; ARALYDRAFT_894250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_201324.1	scaffold_201324.1	scaffold_201324.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-32	111.4	33	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           vp++f CpIs+elM+dPv+++sGitydr++Iekw++sg +tcPvt++ lt+ +++Pn+t+rr+iq wc +
   Q: 33   VPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGS 102
           8*******************************************************************65 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGLSLRVRRR GGSGSKKEII PVTSCSEEVE ITVPSQFQCP ISYELMKDPV IIASGITYDR 60
ENIEKWFESG YQTCPVTNTV LTSLEQIPNH TIRRMIQGWC GSSLGGGIER IPTPRVPVTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGCAAGAG ACGGTCAAAT AATGGGACTT TCATTGAGAG TGAGACGTCG TGGAGGAAGT 60
GGAAGCAAGA AGGAGATTAT TCCGGTGACT AGTTGCTCAG AGGAAGTGGA GATAACGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_894250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007695	Arabidopsis thaliana	93.75	0.00e+00	746.00
IUUC-Bol-015846	Brassica oleracea	72.64	5.00e-165	573.00
IUUC-Bra-017718	Brassica rapa	72.49	3.00e-171	593.00
IUUC-Gma-043233	Glycine max	44.04	4.00e-87	314.00
IUUC-Mtr-058526	Medicago truncatula	41.52	1.00e-90	326.00
IUUC-Oba-075080	Oryza barthii	29.95	7.00e-42	164.00
IUUC-Obr-076534	Oryza brachyantha	35.84	3.00e-60	224.00
IUUC-Ogl-076969	Oryza glaberrima	37.50	1.00e-69	256.00
IUUC-Ogu-078872	Oryza glumaepatula	37.53	3.00e-71	261.00
IUUC-Oin-079622	Oryza indica	37.50	1.00e-69	256.00
IUUC-Olo-080664	Oryza longistaminata	34.72	2.00e-37	149.00
IUUC-Oni-082871	Oryza nivara	37.50	1.00e-69	256.00
IUUC-Opu-084061	Oryza punctata	37.01	4.00e-69	254.00
IUUC-Oru-084561	Oryza rufipogon	37.50	8.00e-70	256.00
IUUC-Osa-086045	Oryza sativa	37.50	1.00e-69	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence