iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006158

Ensembl Protein ID

Al_scaffold_0001_1044

UniProt Accession

D7KLF5; D7KLF5_ARALL

Genbank Protein ID

EFH68838.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_678721

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0001_1044	Al_scaffold_0001_1044	Al_scaffold_0001_1044

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-26	90.7	279	311
UBD/Beta-Prp	4.20e-44	151.6	271	485

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt +v++++f   +++ll+s++ D+++k+WD+
   Q: 279  GHTKGVSAIRFfpkQGHLLLSAGMDCKVKIWDV 311
           8*********997544899*************7 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwd.lstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgq 127
           + l+++ sgh+++v+a++f p++  +l++++ D  +k+wd +++gkc++t+ gh + v+++ fs +g+k+++++ d+ i+ wd+etgq
   Q: 271  KRLVHTWSGHTKGVSAIRFFPKQGhLLLSAGMDCKVKIWDvYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQ 358
           4556666666666666666665545666666666666664134566666666666666666666666666666666666666666666 PP
   S: 128  cleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec 214
           +++++ +g+   v  ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +
   Q: 359  VISTFSTGKIPYVVKLNPDDDKqNILLAGMSDKKIVQWDINTGEITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 445
           666555555555555565555566666666666666666666666666655.666666666666666666666666666666665544 PP
   S: 215  vrtlng.htdnvksvrfspnderlvsgssDgsiriWdlrs 253
           ++   + h   + s+ ++pn+++l+  s D++i i+ +r 
   Q: 446  IKYISEpHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRE 485
           4433333666666666666666666666666666664443 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLIQSYDEE EAVAFSPESS PPRMLKAKSS APEVDDTALA LTVANVNRSK SKPIDPTQHV 60
VLFNPTHEQM WAPIYGPAHP YAKDGIAQGM RNHKLGSVED ASIGSFGFDE QYNTFHKYGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTGA TTCAATCCTA CGACGAAGAA GAAGCCGTTG CTTTCTCGCC GGAATCTTCA 60
CCGCCTCGTA TGTTAAAGGC GAAATCATCG GCGCCGGAGG TAGACGATAC GGCGTTAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

aly:ARALYDRAFT_678721

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	73.85	0.00e+00	791.00
IUUC-Aml-002243	Ailuropoda melanoleuca	45.87	5.00e-100	357.00
IUUC-Atr-002502	Amborella trichopoda	76.22	0.00e+00	891.00
IUUC-Apl-003885	Anas platyrhynchos	51.58	2.00e-156	544.00
IUUC-Aca-004854	Anolis carolinensis	36.78	9.00e-93	333.00
IUUC-Ath-007474	Arabidopsis thaliana	94.59	0.00e+00	1020.00
IUUC-Ago-007726	Ashbya gossypii	39.19	2.00e-70	259.00
IUUC-Acl-008220	Aspergillus clavatus	38.69	2.00e-117	415.00
IUUC-Afl-008473	Aspergillus flavus	39.65	3.00e-114	405.00
IUUC-Afu-008773	Aspergillus fumigatus	38.02	1.00e-116	412.00
IUUC-Ani-009323	Aspergillus nidulans	53.40	2.00e-98	352.00
IUUC-Ang-009851	Aspergillus niger	50.87	2.00e-110	392.00
IUUC-Aor-009950	Aspergillus oryzae	39.65	3.00e-114	405.00
IUUC-Ate-010372	Aspergillus terreus	39.34	4.00e-118	417.00
IUUC-Ame-011660	Astyanax mexicanus	50.19	1.00e-154	539.00
IUUC-Bgr-012230	Blumeria graminis	49.86	4.00e-107	380.00
IUUC-Bta-012568	Bos taurus	50.26	6.00e-157	546.00
IUUC-Bci-013646	Botrytis cinerea	53.31	3.00e-110	391.00
IUUC-Bdi-014199	Brachypodium distachyon	72.98	0.00e+00	790.00
IUUC-Bol-015695	Brassica oleracea	89.86	0.00e+00	1026.00
IUUC-Bra-017923	Brassica rapa	89.32	0.00e+00	1051.00
IUUC-Cel-018535	Caenorhabditis elegans	38.02	3.00e-122	431.00
IUUC-Cja-019071	Callithrix jacchus	50.26	7.00e-157	546.00
IUUC-Cfa-020559	Canis familiaris	50.09	1.00e-156	546.00
IUUC-Cpo-022356	Cavia porcellus	50.26	9.00e-157	546.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	51.63	6.00e-96	343.00
IUUC-Csa-023125	Chlorocebus sabaeus	50.26	4.00e-157	547.00
IUUC-Cho-024676	Choloepus hoffmanni	49.25	1.00e-147	515.00
IUUC-Cin-025229	Ciona intestinalis	49.34	7.00e-149	519.00
IUUC-Csv-025868	Ciona savignyi	68.48	5.00e-38	147.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	46.80	1.00e-95	342.00
IUUC-Cne-026885	Cryptococcus neoformans	60.29	2.00e-129	455.00
IUUC-Dre-027631	Danio rerio	51.03	1.00e-158	552.00
IUUC-Dno-029815	Dasypus novemcinctus	48.77	3.00e-153	535.00
IUUC-Dor-031143	Dipodomys ordii	62.80	1.00e-133	469.00
IUUC-Dse-031520	Dothistroma septosporum	47.40	4.00e-99	354.00
IUUC-Dme-032050	Drosophila melanogaster	46.26	2.00e-150	525.00
IUUC-Ete-032866	Echinops telfairi	49.38	4.00e-150	523.00
IUUC-Eca-033384	Equus caballus	50.09	4.00e-155	540.00
IUUC-Eeu-034471	Erinaceus europaeus	42.51	2.00e-105	375.00
IUUC-Fca-035727	Felis catus	50.26	3.00e-157	547.00
IUUC-Fal-036774	Ficedula albicollis	52.05	4.00e-160	557.00
IUUC-Fox-037951	Fusarium oxysporum	50.42	1.00e-111	395.00
IUUC-Fso-038287	Fusarium solani	53.53	6.00e-111	393.00
IUUC-Gmo-039670	Gadus morhua	49.23	2.00e-160	558.00
IUUC-Ggr-039764	Gaeumannomyces graminis	48.11	2.00e-105	375.00
IUUC-Gga-040293	Gallus gallus	51.87	1.00e-159	556.00
IUUC-Gac-042159	Gasterosteus aculeatus	48.72	1.00e-159	555.00
IUUC-Gma-044299	Glycine max	79.23	0.00e+00	841.00
IUUC-Ggo-044864	Gorilla gorilla	50.44	2.00e-157	548.00
IUUC-Hsa-046602	Homo sapiens	50.44	2.00e-157	548.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	59.90	2.00e-139	488.00
IUUC-Kpa-049318	Komagataella pastoris	46.73	2.00e-91	328.00
IUUC-Lch-049796	Latimeria chalumnae	43.18	2.00e-127	448.00
IUUC-Lpe-051153	Leersia perrieri	73.33	0.00e+00	807.00
IUUC-Loc-052467	Lepisosteus oculatus	47.59	6.00e-159	553.00
IUUC-Lma-053107	Leptosphaeria maculans	51.16	6.00e-108	383.00
IUUC-Laf-053787	Loxodonta africana	50.09	1.00e-159	556.00
IUUC-Mcc-055706	Macaca mulatta	50.26	6.00e-157	546.00
IUUC-Meu-056757	Macropus eugenii	60.30	4.00e-120	424.00
IUUC-Mor-057079	Magnaporthe oryzae	49.01	2.00e-105	375.00
IUUC-Mpo-057533	Magnaporthe poae	50.43	1.00e-106	379.00
IUUC-Mtr-057950	Medicago truncatula	79.54	0.00e+00	889.00
IUUC-Mla-058910	Melampsora laricipopulina	45.21	1.00e-138	486.00
IUUC-Mga-059366	Meleagris gallopavo	51.87	2.00e-159	555.00
IUUC-Mvi-060349	Microbotryum violaceum	58.31	7.00e-126	444.00
IUUC-Mmr-061209	Microcebus murinus	50.44	4.00e-161	560.00
IUUC-Mdo-062118	Monodelphis domestica	51.87	2.00e-160	558.00
IUUC-Mmu-063173	Mus musculus	52.06	2.00e-156	545.00
IUUC-Mac-065080	Musa acuminata	76.43	0.00e+00	868.00
IUUC-Mpu-066659	Mustela putorius furo	50.26	3.00e-157	547.00
IUUC-Mlu-067029	Myotis lucifugus	51.97	2.00e-156	545.00
IUUC-Nfi-068334	Neosartorya fischeri	40.29	3.00e-118	418.00
IUUC-Ncr-068675	Neurospora crassa	46.89	2.00e-91	328.00
IUUC-Nle-070113	Nomascus leucogenys	50.44	4.00e-158	550.00
IUUC-Opr-070685	Ochotona princeps	47.32	2.00e-146	511.00
IUUC-Ont-071680	Oreochromis niloticus	50.75	1.00e-158	552.00
IUUC-Oan-073573	Ornithorhynchus anatinus	50.79	3.00e-145	507.00
IUUC-Ocu-074074	Oryctolagus cuniculus	50.26	3.00e-160	557.00
IUUC-Oba-075625	Oryza barthii	71.90	0.00e+00	811.00
IUUC-Obr-076510	Oryza brachyantha	72.07	0.00e+00	816.00
IUUC-Ogl-077275	Oryza glaberrima	71.90	0.00e+00	811.00
IUUC-Ogu-078563	Oryza glumaepatula	71.90	0.00e+00	810.00
IUUC-Oin-079898	Oryza indica	81.82	0.00e+00	674.00
IUUC-Olo-081080	Oryza longistaminata	73.85	0.00e+00	744.00
IUUC-Oni-083121	Oryza nivara	71.90	0.00e+00	811.00
IUUC-Opu-083329	Oryza punctata	73.19	0.00e+00	804.00
IUUC-Oru-084807	Oryza rufipogon	70.68	0.00e+00	714.00
IUUC-Osa-086039	Oryza sativa	71.94	0.00e+00	813.00
IUUC-Ola-087149	Oryzias latipes	49.66	5.00e-161	560.00
IUUC-Olu-087627	Ostreococcus lucimarinus	49.61	8.00e-147	513.00
IUUC-Oga-088359	Otolemur garnettii	50.80	2.00e-156	545.00
IUUC-Oar-089390	Ovis aries	50.26	2.00e-156	545.00
IUUC-Ptr-090894	Pan troglodytes	50.44	2.00e-157	548.00
IUUC-Pan-092476	Papio anubis	50.26	6.00e-157	546.00
IUUC-Psi-093527	Pelodiscus sinensis	49.60	5.00e-143	500.00
IUUC-Pno-094771	Phaeosphaeria nodorum	49.86	3.00e-106	378.00
IUUC-Ppa-095386	Physcomitrella patens	74.82	0.00e+00	847.00
IUUC-Pfo-096139	Poecilia formosa	49.49	4.00e-161	560.00
IUUC-Pab-097838	Pongo abelii	48.92	4.00e-133	467.00
IUUC-Pop-099962	Populus trichocarpa	81.52	0.00e+00	912.00
IUUC-Pca-100876	Procavia capensis	42.76	2.00e-127	448.00
IUUC-Ppe-101777	Prunus persica	79.42	0.00e+00	879.00
IUUC-Pva-102418	Pteropus vampyrus	50.26	4.00e-157	547.00
IUUC-Pgr-103456	Puccinia graminis	50.18	2.00e-149	521.00
IUUC-Ptt-103731	Puccinia triticina	47.33	3.00e-135	474.00
IUUC-Pte-104386	Pyrenophora teres	48.77	4.00e-105	374.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	48.90	7.00e-105	373.00
IUUC-Rno-105694	Rattus norvegicus	49.03	6.00e-149	520.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.39	2.00e-74	272.00
IUUC-Sha-106709	Sarcophilus harrisii	51.69	1.00e-158	551.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	37.05	1.00e-109	389.00
IUUC-Spo-108331	Schizosaccharomyces pombe	48.30	4.00e-104	371.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	54.07	7.00e-99	353.00
IUUC-Smo-109326	Selaginella moellendorffii	60.75	0.00e+00	658.00
IUUC-Sit-110446	Setaria italica	73.45	0.00e+00	796.00
IUUC-Sly-111330	Solanum lycopersicum	80.62	0.00e+00	882.00
IUUC-Stu-112610	Solanum tuberosum	78.28	0.00e+00	889.00
IUUC-Sar-113065	Sorex araneus	38.10	1.00e-38	153.00
IUUC-Sbi-114005	Sorghum bicolor	73.39	0.00e+00	784.00
IUUC-Sre-114988	Sporisorium reilianum	44.84	4.00e-136	477.00
IUUC-Ssc-115760	Sus scrofa	50.26	4.00e-157	547.00
IUUC-Tgu-116493	Taeniopygia guttata	52.25	5.00e-162	563.00
IUUC-Tru-118489	Takifugu rubripes	48.95	1.00e-157	549.00
IUUC-Tsy-119332	Tarsius syrichta	50.26	6.00e-161	560.00
IUUC-Tni-120202	Tetraodon nigroviridis	47.25	7.00e-149	520.00
IUUC-Tca-121429	Theobroma cacao	79.49	0.00e+00	906.00
IUUC-Tre-122162	Trichoderma reesei	53.78	2.00e-113	402.00
IUUC-Tvi-122500	Trichoderma virens	53.49	3.00e-113	401.00
IUUC-Tae-125557	Triticum aestivum	73.22	0.00e+00	794.00
IUUC-Tur-126554	Triticum urartu	73.31	0.00e+00	790.00
IUUC-Tme-126919	Tuber melanosporum	41.40	2.00e-123	435.00
IUUC-Tbe-127968	Tupaia belangeri	47.45	2.00e-145	508.00
IUUC-Ttr-129215	Tursiops truncatus	51.87	2.00e-154	538.00
IUUC-Uma-129622	Ustilago maydis	45.37	4.00e-137	481.00
IUUC-Vda-129750	Verticillium dahliae	52.27	3.00e-110	391.00
IUUC-Vpa-130617	Vicugna pacos	51.50	1.00e-150	525.00
IUUC-Vvi-131238	Vitis vinifera	81.82	0.00e+00	899.00
IUUC-Xtr-131865	Xenopus tropicalis	49.22	2.00e-157	548.00
IUUC-Xma-133627	Xiphophorus maculatus	49.74	9.00e-161	559.00
IUUC-Yli-134390	Yarrowia lipolytica	51.98	3.00e-107	381.00
IUUC-Zma-135925	Zea mays	72.91	0.00e+00	783.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence