iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017125

Ensembl Protein ID

Bra007751.1-P

UniProt Accession

M4CU57; M4CU57_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007751	Bra007751.1	Bra007751.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-29	101.0	190	227
UBD/Beta-Prp	3.70e-43	148.8	87	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d ++cl++ ++ +ll s+s+D tikvW++++ ++l 
   Q: 190  HADAISCLSLnDEqGLLYSASWDRTIKVWRISDSKCLE 227
           9*********6559*****************9999986 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls............................. 82
           ++    k+ll tgs+++ i+vw++ +   ++ ++ +++ v+a+ +s +   + tg++D+ i+vw +s                             
   Q: 87   LAA--TKDLLYTGSDSKNIRVWKNLK--EFSAFKCNSGLVKAIVISGE--KIFTGHQDGKIRVWKVSpknqslhkrsgtlptlkdifkaslkprny 176
           444..899****************99..5689***************9..69************88888999**********************99 PP
   S: 83   ...tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktg 169
              +   +  + +h d + +ls++ ++  l s+s+drti+vw ++  +cle     hd++vn+vv+   + +++sGs+D+tv+ W+          
   Q: 177  vevKKNRTALWIKHADAISCLSLNDEQGLLYSASWDRTIKVWRISDSKCLE-SIPAHDDAVNSVVSTT-EAIVFSGSADGTVKAWKReqkgkyTKH 270
           9995555555666**************************************.6666777777776655.69****************999999999 PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvr 229
           +l++tlt+ ++++v+ l++++ng  +  gs dg v++w+ + + +    l+gh+  v++++
   Q: 271  TLMQTLTK-QESAVTALAVSKNGAAVYFGSSDGLVNFWEREkQLNYGGVLKGHKLAVLCLE 330
           *******9.******************************9943344677899998888876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MMHSDPNLAS TTTNQTEEEY GVRNSSASAV GTGMYDRMSC EGSPMMMSPW NQANPFAQTQ 60
WPNVEENLPQ NGLIGSLVRE EGHIYSLAAT KDLLYTGSDS KNIRVWKNLK EFSAFKCNSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCATT CTGATCCGAA TCTCGCATCC ACAACGACTA ACCAAACAGA GGAAGAGTAC 60
GGCGTACGCA ACAGCAGTGC ATCTGCGGTC GGCACAGGCA TGTACGATAG AATGAGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006909	Arabidopsis thaliana	94.22	0.00e+00	837.00
IUUC-Bdi-014024	Brachypodium distachyon	59.86	1.00e-130	459.00
IUUC-Gma-043481	Glycine max	67.47	6.00e-165	573.00
IUUC-Hvu-047445	Hordeum vulgare	59.67	5.00e-131	460.00
IUUC-Mtr-057641	Medicago truncatula	69.83	3.00e-169	587.00
IUUC-Oba-075783	Oryza barthii	58.89	9.00e-131	459.00
IUUC-Ogl-077280	Oryza glaberrima	58.89	9.00e-131	459.00
IUUC-Ogu-078924	Oryza glumaepatula	58.89	4.00e-132	464.00
IUUC-Oin-079931	Oryza indica	58.89	9.00e-131	459.00
IUUC-Olo-080744	Oryza longistaminata	59.89	2.00e-109	389.00
IUUC-Oni-082948	Oryza nivara	58.89	9.00e-131	459.00
IUUC-Opu-083881	Oryza punctata	59.21	1.00e-130	459.00
IUUC-Oru-084999	Oryza rufipogon	58.89	9.00e-131	459.00
IUUC-Osa-085749	Oryza sativa	58.89	9.00e-131	459.00
IUUC-Pop-099814	Populus trichocarpa	73.12	8.00e-180	622.00
IUUC-Smo-108849	Selaginella moellendorffii	37.74	8.00e-55	207.00
IUUC-Sbi-114260	Sorghum bicolor	61.64	1.00e-129	456.00
IUUC-Tae-123171	Triticum aestivum	55.41	2.00e-128	452.00
IUUC-Vvi-131140	Vitis vinifera	75.06	2.00e-179	621.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence