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Tag Content
UUCD2 ID IUUC-Bdi-014458
UUCD1 version UUC-BrD-01362
Ensembl Protein ID BRADI1G08810.1
UniProt Accession I1GND0; I1GND0_BRADI
Genbank Protein ID KQK13238.1
Protein Name tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog
Genbank Nucleotide ID CM000880
Gene Name LOC100845342; BRADI_1g08810
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI1G08810 BRADI1G08810.1 BRADI1G08810.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-14 53.8 200 238
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+ v+c+af     +  +l+sG++D t+++WD+  g 
   Q: 200  GHTEFVSCIAFthlsGGsSFLLSGGGDSTVRLWDYINGC 238
           8**********999622589**************86665 PP
   
Organism Brachypodium distachyon
Functional Description
(View)

Functional Description


     Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
 Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
Protein Sequence
(Fasta)
MEDVVVEEAE VSGAAEFAPA LVAAHPLGHS VAVAVGPELR VFDLKGGCAV SMSDDSGGSS 60
HSDAIRAISF SADGILLASA GDDKLVKIWK TDSWRCIRTI TSEKRVSAVA ISKDGLYVTF 120
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Protein Fasta Sequence


>IUUC-Bdi-014458|E3,WD_repeat|Brachypodium distachyon
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGGACG TAGTGGTCGA GGAGGCGGAG GTGAGCGGCG CGGCAGAGTT CGCGCCGGCG 60
CTCGTCGCGG CCCACCCGCT CGGCCACTCC GTCGCCGTCG CCGTCGGGCC CGAGCTCCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Bdi-014458|E3,WD_repeat|Brachypodium distachyon
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat
Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043527--C:tRNA methyltransferase complex
GO:0008618--P:7-methylguanosine metabolic process
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation
KEGG bdi:100845342
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000556 Aegilops tauschii 83.17 2.00e-168 584.00
IUUC-Atr-002431 Amborella trichopoda 56.80 2.00e-34 137.00
IUUC-Apl-003975 Anas platyrhynchos 31.05 2.00e-23 102.00
IUUC-Aca-005170 Anolis carolinensis 31.88 5.00e-17 81.30
IUUC-Aly-005769 Arabidopsis lyrata 52.59 1.00e-106 379.00
IUUC-Ath-006733 Arabidopsis thaliana 52.31 5.00e-103 367.00
IUUC-Ame-010613 Astyanax mexicanus 33.19 9.00e-23 100.00
IUUC-Bgr-012067 Blumeria graminis 36.23 2.00e-15 76.30
IUUC-Bta-012788 Bos taurus 31.45 2.00e-23 102.00
IUUC-Bol-015373 Brassica oleracea 53.10 3.00e-97 349.00
IUUC-Bra-016644 Brassica rapa 52.26 4.00e-100 358.00
IUUC-Cpo-021963 Cavia porcellus 36.04 2.00e-22 99.40
IUUC-Csa-024148 Chlorocebus sabaeus 36.55 6.00e-17 80.90
IUUC-Cne-026834 Cryptococcus neoformans 29.49 3.00e-16 79.30
IUUC-Dre-028427 Danio rerio 34.19 2.00e-23 102.00
IUUC-Dor-030522 Dipodomys ordii 31.45 1.00e-23 103.00
IUUC-Dme-032136 Drosophila melanogaster 29.78 5.00e-13 68.20
IUUC-Fca-035833 Felis catus 30.65 2.00e-22 99.00
IUUC-Fal-037497 Ficedula albicollis 30.12 2.00e-21 95.50
IUUC-Gga-040547 Gallus gallus 30.65 6.00e-22 97.80
IUUC-Gac-041761 Gasterosteus aculeatus 34.41 5.00e-19 87.80
IUUC-Gma-043722 Glycine max 52.13 4.00e-100 357.00
IUUC-Ggo-045340 Gorilla gorilla 36.04 1.00e-15 77.00
IUUC-Hsa-046403 Homo sapiens 36.87 1.00e-17 83.20
IUUC-Hvu-047643 Hordeum vulgare 88.22 0.00e+00 651.00
IUUC-Itr-048103 Ictidomys tridecemlineatus 31.45 8.00e-23 100.00
IUUC-Kpa-049283 Komagataella pastoris 35.00 4.00e-15 75.10
IUUC-Lch-050682 Latimeria chalumnae 31.58 2.00e-22 99.40
IUUC-Lpe-050712 Leersia perrieri 83.69 0.00e+00 662.00
IUUC-Loc-052599 Lepisosteus oculatus 31.58 6.00e-24 104.00
IUUC-Laf-054390 Loxodonta africana 30.36 2.00e-22 99.00
IUUC-Mcc-054747 Macaca mulatta 36.55 3.00e-17 82.40
IUUC-Mtr-058600 Medicago truncatula 51.66 2.00e-106 378.00
IUUC-Mla-059135 Melampsora laricipopulina 30.61 1.00e-17 84.00
IUUC-Mga-059876 Meleagris gallopavo 29.55 3.00e-20 91.70
IUUC-Mmr-061518 Microcebus murinus 32.26 8.00e-24 103.00
IUUC-Mac-065625 Musa acuminata 59.06 3.00e-122 431.00
IUUC-Nle-069914 Nomascus leucogenys 30.65 2.00e-14 72.80
IUUC-Ont-071555 Oreochromis niloticus 28.62 2.00e-20 92.80
IUUC-Oan-072951 Ornithorhynchus anatinus 30.52 3.00e-22 98.60
IUUC-Ocu-074679 Oryctolagus cuniculus 34.01 6.00e-20 90.90
IUUC-Oba-075355 Oryza barthii 78.52 1.00e-174 605.00
IUUC-Obr-076769 Oryza brachyantha 84.16 0.00e+00 692.00
IUUC-Ogl-077168 Oryza glaberrima 84.69 0.00e+00 675.00
IUUC-Ogu-078275 Oryza glumaepatula 78.04 6.00e-173 599.00
IUUC-Oin-079207 Oryza indica 84.69 0.00e+00 675.00
IUUC-Ome-081169 Oryza meridionalis 83.65 2.00e-94 339.00
IUUC-Oni-082437 Oryza nivara 78.76 1.00e-174 605.00
IUUC-Opu-084031 Oryza punctata 84.93 0.00e+00 675.00
IUUC-Oru-084380 Oryza rufipogon 78.76 3.00e-175 607.00
IUUC-Osa-085327 Oryza sativa 84.93 0.00e+00 677.00
IUUC-Ola-086716 Oryzias latipes 34.38 6.00e-22 97.80
IUUC-Olu-087708 Ostreococcus lucimarinus 36.59 1.00e-35 142.00
IUUC-Oar-090239 Ovis aries 31.05 3.00e-23 102.00
IUUC-Ptr-090851 Pan troglodytes 36.36 4.00e-16 78.60
IUUC-Pan-092558 Papio anubis 36.55 6.00e-17 81.30
IUUC-Psi-093792 Pelodiscus sinensis 29.32 4.00e-20 91.70
IUUC-Ppa-095757 Physcomitrella patens 40.42 6.00e-68 250.00
IUUC-Pfo-096465 Poecilia formosa 30.45 6.00e-19 87.80
IUUC-Pab-097722 Pongo abelii 36.41 7.00e-17 80.90
IUUC-Pop-098979 Populus trichocarpa 53.38 6.00e-106 376.00
IUUC-Pca-100753 Procavia capensis 46.39 6.00e-14 71.20
IUUC-Ppe-101515 Prunus persica 57.21 1.00e-115 409.00
IUUC-Sja-107780 Schizosaccharomyces japonicus 28.25 3.00e-16 78.60
IUUC-Smo-108938 Selaginella moellendorffii 40.23 3.00e-67 248.00
IUUC-Sit-110020 Setaria italica 83.13 0.00e+00 657.00
IUUC-Sly-111543 Solanum lycopersicum 54.50 2.00e-115 408.00
IUUC-Stu-111925 Solanum tuberosum 54.27 2.00e-114 404.00
IUUC-Sbi-114061 Sorghum bicolor 81.52 0.00e+00 657.00
IUUC-Tgu-117321 Taeniopygia guttata 30.00 5.00e-18 84.30
IUUC-Tru-118454 Takifugu rubripes 32.34 7.00e-23 100.00
IUUC-Tni-119894 Tetraodon nigroviridis 32.91 1.00e-20 93.20
IUUC-Tca-121746 Theobroma cacao 55.63 2.00e-113 402.00
IUUC-Tae-123054 Triticum aestivum 88.49 0.00e+00 653.00
IUUC-Tur-126254 Triticum urartu 83.29 9.00e-159 551.00
IUUC-Tbe-127683 Tupaia belangeri 50.53 3.00e-16 79.00
IUUC-Ttr-129056 Tursiops truncatus 35.90 9.00e-23 100.00
IUUC-Vvi-131428 Vitis vinifera 55.58 1.00e-119 422.00
IUUC-Xma-133605 Xiphophorus maculatus 30.71 3.00e-18 85.50
Created Date 25-Jun-2017

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