iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016718

Ensembl Protein ID

Bra022355.1-P

UniProt Accession

M4E0Q8; M4E0Q8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022355	Bra022355.1	Bra022355.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-08	33.6	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   ++ +++lp C H fh  C+ kw       s + +CP+Cr
   Q: 129  CAICLSEFvsgER-VKLLPkCHHGFHVRCIDKW------LSSHSSCPTCR 171
           ********99777.*******************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSAETFAPII YEDFLENFYS RRLLLHRAYQ PPTMASPPFG DAHEASHSHA HQMSFDANVV 60
MVLSVLLCAL VCSLGLHSII RCLLRYSSEA SEELTVRMAN TGVKRKALKS FQTVSYSTEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTG AAACATTTGC TCCCATTATC TATGAAGATT TTCTTGAGAA CTTTTACTCA 60
AGAAGGCTAC TACTTCACAG AGCTTATCAA CCACCTACCA TGGCATCTCC TCCATTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016587	Brassica oleracea	96.74	5.00e-112	396.00
IUUC-Gma-043621	Glycine max	55.75	1.00e-61	228.00
IUUC-Oba-075992	Oryza barthii	46.89	1.00e-30	126.00
IUUC-Obr-076307	Oryza brachyantha	46.33	4.00e-31	127.00
IUUC-Ogl-077735	Oryza glaberrima	46.89	7.00e-31	126.00
IUUC-Olo-080939	Oryza longistaminata	46.89	3.00e-31	127.00
IUUC-Ome-081946	Oryza meridionalis	46.93	2.00e-31	129.00
IUUC-Oni-083084	Oryza nivara	46.89	7.00e-31	127.00
IUUC-Oru-084596	Oryza rufipogon	46.89	5.00e-31	127.00
IUUC-Osa-085865	Oryza sativa	46.89	4.00e-31	127.00
IUUC-Pop-099825	Populus trichocarpa	62.33	2.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence