iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043693

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100787934; GLYMA_04G215600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G39360	GLYMA04G39360.1	GLYMA04G39360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-08	34.3	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl++f   ++ +++lp C+H fh  C+ kw       s + +CP Cr
   Q: 140  CVICLSEFtsgDK-VRILPkCNHRFHVRCIDKW------LSSHSSCPKCR 182
           ********88555.*******************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MYSAASTSFT SPLLHDLENF HYSRRLLLHS PYLNQSEKPP TSSHDSTETY LGDGNFDANV 60
VMVLSVLLCA LICSLGLNSI IRCALRCSNF VVSDSVATNN NNPPAAARVA NTGVKKKALK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTATTTCAA GAGTACCCTC TAGGTTGTTG CACTTGAGCT AGGCTCAACC AAAAGGAAGG 60
TGGAAAAAAA ACAGAAGATC TTTCACATGA ACTCTTTCCT GTGGGCAAGT ACAGATAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006297	Arabidopsis lyrata	54.92	1.00e-55	209.00
IUUC-Bdi-014146	Brachypodium distachyon	48.15	8.00e-44	169.00
IUUC-Lpe-051348	Leersia perrieri	47.39	2.00e-40	158.00
IUUC-Mtr-058186	Medicago truncatula	69.96	4.00e-79	287.00
IUUC-Oba-075992	Oryza barthii	51.41	4.00e-34	138.00
IUUC-Obr-076307	Oryza brachyantha	51.98	6.00e-35	140.00
IUUC-Ogl-077735	Oryza glaberrima	51.41	7.00e-34	136.00
IUUC-Ogu-078127	Oryza glumaepatula	50.85	1.00e-33	136.00
IUUC-Olo-080939	Oryza longistaminata	51.41	2.00e-34	138.00
IUUC-Ome-081946	Oryza meridionalis	49.46	6.00e-34	137.00
IUUC-Oni-083084	Oryza nivara	51.41	4.00e-34	138.00
IUUC-Oru-084596	Oryza rufipogon	51.41	3.00e-34	138.00
IUUC-Osa-085865	Oryza sativa	51.41	6.00e-34	137.00
IUUC-Ppe-101930	Prunus persica	68.14	6.00e-73	266.00
IUUC-Stu-112198	Solanum tuberosum	53.56	1.00e-59	222.00
IUUC-Tca-120946	Theobroma cacao	61.70	3.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence