iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051367

Ensembl Protein ID

LPERR04G13560.1

UniProt Accession

A0A0D9W6I6; A0A0D9W6I6_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR04G13560	LPERR04G13560.1	LPERR04G13560.1
LPERR04G13560	LPERR04G13560.4	LPERR04G13560.4
LPERR04G13560	LPERR04G13560.5	LPERR04G13560.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.20e-30	104.5	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM dPvv++sG+ty+r++I+kw++sg++tcP+tr +l++ +++Pn+ ++ li +wce+n++
   Q: 279  PPEELRCPISLQLMYDPVVIASGQTYERACIKKWFSSGNTTCPKTRNELSQLSMTPNYCIKGLIASWCEQNGV 351
           59********************************************************************985 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MEKVEVDGNF IAAGNWKLHG ALCKQLHKVV LEILDAIPVL EATRPGNSSG LLALSSLRIA 60
VEKAKNLLQY CSECSKLYLA LTADNVLAKF VKARYALLEC LHQLEETLPE ASSSQILDIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGTTGCGT TCCCTACAGT ATTTTCTCTC GCCACCAATC AGGTCGCGGC CCGGTGCCGA 60
TCGATCAGTC TCTAGCGCTT CGCTTTGCTG CGCTCCCCCG GCACGCGACG ACGAAAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000137	Aegilops tauschii	69.69	0.00e+00	899.00
IUUC-Bdi-014255	Brachypodium distachyon	71.91	0.00e+00	916.00
IUUC-Hvu-047784	Hordeum vulgare	69.60	0.00e+00	879.00
IUUC-Oba-075113	Oryza barthii	85.83	0.00e+00	1237.00
IUUC-Obr-076015	Oryza brachyantha	82.88	0.00e+00	1228.00
IUUC-Ogl-077487	Oryza glaberrima	85.96	0.00e+00	1240.00
IUUC-Ogu-078548	Oryza glumaepatula	86.10	0.00e+00	1241.00
IUUC-Oin-079540	Oryza indica	86.10	0.00e+00	1241.00
IUUC-Olo-080654	Oryza longistaminata	85.45	0.00e+00	1231.00
IUUC-Ome-081838	Oryza meridionalis	83.54	0.00e+00	1279.00
IUUC-Oni-082806	Oryza nivara	86.10	0.00e+00	1241.00
IUUC-Opu-083802	Oryza punctata	85.68	0.00e+00	1224.00
IUUC-Oru-084879	Oryza rufipogon	86.10	0.00e+00	1241.00
IUUC-Osa-085564	Oryza sativa	86.10	0.00e+00	1241.00
IUUC-Sit-110478	Setaria italica	67.19	0.00e+00	949.00
IUUC-Sbi-114006	Sorghum bicolor	64.62	0.00e+00	862.00
IUUC-Tae-123859	Triticum aestivum	70.15	0.00e+00	891.00
IUUC-Tur-126528	Triticum urartu	69.32	0.00e+00	863.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence