iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s06020	POPTR_0006s06020.2	POPTR_0006s06020.2
POPTR_0006s06020	POPTR_0006s06020.1	POPTR_0006s06020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.30e-13	50.9	428	456
ULD/UDP/UBQ/UBQ_Other	4.20e-08	34.0	19	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGFdreealqaLraannnleaAv 35
            +eqlv+MGF+r++++ a +a +++le+++
   Q: 428  TVEQLVSMGFERSRVIGAVQA-GGSLEEVM 456
           59*******************.*****986 PP

ULD/UDP/UBQ/UBQ_Other

   S: 15   lkvnpsd.tVaeLKekiekklgippeqqrLiykGkiL.....eddktLadyglkdgstih 68
           l+v+p + tV+ L+e+i k+ +++ e+++Li++Gk+L     e+ ++L+++g+k++s+i+
   Q: 19   LEVEPENwTVLMLREEIAKRSNMGTESINLIFAGKVLkdctsEEKNSLSQLGIKNNSKIL 78
           45555555*****************************999999999************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPSMAKLK VAGTWAGVLE VEPENWTVLM LREEIAKRSN MGTESINLIF AGKVLKDCTS 60
EEKNSLSQLG IKNNSKILAC RVSVEEGKTL KNELLADDER NRRLARIKAA VTALSKRHAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGAAAGAA ACTAACTTTT ATTCCCTCCT CACACAGACA GTCACAAAGC CCACAAGACA 60
AAAACACAAT GTCTTCTCCT TCAATGGCAA AACTGAAGGT AGCAGGAACA TGGGCTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00165--UBA

KEGG

pop:POPTR_0006s06020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002011	Ailuropoda melanoleuca	25.65	3.00e-26	112.00
IUUC-Apl-003818	Anas platyrhynchos	26.84	8.00e-23	101.00
IUUC-Aca-004439	Anolis carolinensis	24.68	7.00e-18	85.10
IUUC-Aly-005796	Arabidopsis lyrata	56.43	2.00e-169	588.00
IUUC-Ath-007419	Arabidopsis thaliana	57.39	7.00e-168	583.00
IUUC-Ame-011290	Astyanax mexicanus	25.55	2.00e-22	99.80
IUUC-Bta-013446	Bos taurus	27.60	1.00e-27	117.00
IUUC-Cja-018982	Callithrix jacchus	29.24	3.00e-26	112.00
IUUC-Cfa-020919	Canis familiaris	25.86	3.00e-27	116.00
IUUC-Cpo-021709	Cavia porcellus	26.52	4.00e-28	119.00
IUUC-Cre-023004	Chlamydomonas reinhardtii	35.56	2.00e-27	118.00
IUUC-Csa-023986	Chlorocebus sabaeus	25.07	2.00e-24	106.00
IUUC-Cho-024391	Choloepus hoffmanni	29.45	1.00e-19	90.10
IUUC-Dre-028258	Danio rerio	27.52	2.00e-27	116.00
IUUC-Dno-029732	Dasypus novemcinctus	24.48	3.00e-26	112.00
IUUC-Dor-030896	Dipodomys ordii	27.30	3.00e-24	106.00
IUUC-Dme-031789	Drosophila melanogaster	26.15	1.00e-24	107.00
IUUC-Ete-032810	Echinops telfairi	30.92	4.00e-16	79.30
IUUC-Eca-033649	Equus caballus	25.54	5.00e-27	115.00
IUUC-Fca-035979	Felis catus	24.53	1.00e-26	114.00
IUUC-Fal-036708	Ficedula albicollis	24.10	6.00e-23	102.00
IUUC-Gmo-039174	Gadus morhua	27.04	7.00e-22	98.20
IUUC-Gga-040165	Gallus gallus	26.32	1.00e-23	103.00
IUUC-Gac-042269	Gasterosteus aculeatus	29.17	7.00e-24	104.00
IUUC-Ggo-045525	Gorilla gorilla	26.24	1.00e-26	114.00
IUUC-Hsa-046456	Homo sapiens	25.07	2.00e-25	109.00
IUUC-Itr-048763	Ictidomys tridecemlineatus	25.88	6.00e-25	108.00
IUUC-Lch-049579	Latimeria chalumnae	26.76	8.00e-21	94.70
IUUC-Loc-051974	Lepisosteus oculatus	28.79	1.00e-28	120.00
IUUC-Laf-053661	Loxodonta africana	26.49	1.00e-26	114.00
IUUC-Mcc-054599	Macaca mulatta	25.07	2.00e-24	106.00
IUUC-Meu-055935	Macropus eugenii	26.20	1.00e-25	110.00
IUUC-Mtr-058497	Medicago truncatula	59.30	4.00e-174	603.00
IUUC-Mga-059711	Meleagris gallopavo	26.62	5.00e-24	105.00
IUUC-Mmr-061079	Microcebus murinus	25.88	3.00e-25	109.00
IUUC-Mdo-062991	Monodelphis domestica	25.44	5.00e-25	108.00
IUUC-Mmu-064280	Mus musculus	26.13	2.00e-26	114.00
IUUC-Mpu-066376	Mustela putorius furo	25.44	1.00e-26	114.00
IUUC-Mlu-067808	Myotis lucifugus	24.86	1.00e-24	107.00
IUUC-Nle-069384	Nomascus leucogenys	24.41	6.00e-29	121.00
IUUC-Opr-071209	Ochotona princeps	22.70	2.00e-06	47.00
IUUC-Ont-071237	Oreochromis niloticus	26.35	1.00e-23	103.00
IUUC-Oan-073241	Ornithorhynchus anatinus	25.29	3.00e-23	102.00
IUUC-Ocu-074372	Oryctolagus cuniculus	25.22	2.00e-25	110.00
IUUC-Ogu-078907	Oryza glumaepatula	48.08	1.00e-127	449.00
IUUC-Ome-081393	Oryza meridionalis	48.52	5.00e-128	450.00
IUUC-Oni-082606	Oryza nivara	47.90	4.00e-127	447.00
IUUC-Oru-084709	Oryza rufipogon	48.19	1.00e-128	452.00
IUUC-Osa-085543	Oryza sativa	63.64	2.00e-10	58.20
IUUC-Ola-086447	Oryzias latipes	29.11	3.00e-26	112.00
IUUC-Oga-087931	Otolemur garnettii	24.32	2.00e-25	110.00
IUUC-Oar-090452	Ovis aries	26.59	1.00e-27	117.00
IUUC-Ptr-091538	Pan troglodytes	25.89	1.00e-25	110.00
IUUC-Pan-092411	Papio anubis	25.66	1.00e-24	107.00
IUUC-Psi-093867	Pelodiscus sinensis	27.14	5.00e-21	95.50
IUUC-Pma-094370	Petromyzon marinus	26.40	1.00e-25	110.00
IUUC-Ppa-096000	Physcomitrella patens	44.01	4.00e-104	371.00
IUUC-Pab-097956	Pongo abelii	25.65	8.00e-26	111.00
IUUC-Pva-102894	Pteropus vampyrus	26.46	5.00e-20	92.40
IUUC-Rno-105948	Rattus norvegicus	24.32	3.00e-24	106.00
IUUC-Smo-109087	Selaginella moellendorffii	39.79	4.00e-98	351.00
IUUC-Sar-113510	Sorex araneus	27.43	2.00e-13	70.50
IUUC-Ssc-116283	Sus scrofa	26.20	8.00e-27	114.00
IUUC-Tgu-116651	Taeniopygia guttata	24.10	5.00e-23	102.00
IUUC-Tru-118492	Takifugu rubripes	27.05	2.00e-22	100.00
IUUC-Tsy-119635	Tarsius syrichta	27.00	7.00e-23	101.00
IUUC-Tni-120691	Tetraodon nigroviridis	28.12	2.00e-25	110.00
IUUC-Tbe-127414	Tupaia belangeri	26.67	1.00e-23	104.00
IUUC-Ttr-128330	Tursiops truncatus	26.25	3.00e-22	99.40
IUUC-Vpa-130210	Vicugna pacos	27.59	7.00e-25	108.00
IUUC-Xtr-132695	Xenopus tropicalis	23.97	2.00e-20	93.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence