iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017950

Ensembl Protein ID

Bra011359.1-P

UniProt Accession

M4D4F5; M4D4F5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011359	Bra011359.1	Bra011359.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-07	31.8	326	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   ++++ lpC H+fh++C+ kw       + +++CPlC+
   Q: 326  CCICLAKYanNEELRELPCSHFFHKECVDKW------LKINASCPLCK 367
           ********88555******************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MERSSDHVID IPSTASSSHD RISNVLEPLQ HESPSTPPPL PVSQPVATVS SASSSTRSNP 60
RTNRRRRSPL NSGLWISIEL FLTLGQIVAA IVVLSLSKHE HPRAPLFAWI VGYACGCVAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACGTT CATCAGATCA CGTCATTGAC ATCCCATCCA CTGCTTCCTC TTCCCACGAT 60
AGAATCTCCA ACGTCTTGGA GCCTCTACAA CACGAATCAC CTTCCACTCC TCCTCCATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	55.17	1.00e-114	406.00
IUUC-Atr-002558	Amborella trichopoda	61.59	3.00e-100	358.00
IUUC-Aly-005824	Arabidopsis lyrata	85.00	6.00e-176	610.00
IUUC-Ath-007421	Arabidopsis thaliana	84.71	3.00e-177	614.00
IUUC-Bdi-014783	Brachypodium distachyon	62.06	1.00e-103	369.00
IUUC-Bol-015448	Brassica oleracea	92.64	0.00e+00	698.00
IUUC-Cme-027312	Cyanidioschyzon merolae	30.54	2.00e-22	99.40
IUUC-Gma-043836	Glycine max	65.23	1.00e-112	399.00
IUUC-Hvu-047447	Hordeum vulgare	52.50	1.00e-115	409.00
IUUC-Lpe-050851	Leersia perrieri	62.34	4.00e-113	400.00
IUUC-Mtr-058402	Medicago truncatula	67.66	2.00e-111	395.00
IUUC-Mac-065365	Musa acuminata	56.69	4.00e-97	347.00
IUUC-Ncr-068932	Neurospora crassa	34.31	5.00e-10	58.90
IUUC-Oba-075730	Oryza barthii	56.66	5.00e-115	407.00
IUUC-Obr-076189	Oryza brachyantha	55.47	5.00e-113	400.00
IUUC-Ogl-077454	Oryza glaberrima	56.66	5.00e-115	407.00
IUUC-Ogu-078902	Oryza glumaepatula	56.92	8.00e-116	409.00
IUUC-Oin-079324	Oryza indica	56.66	1.00e-114	406.00
IUUC-Olo-080365	Oryza longistaminata	56.92	1.00e-115	409.00
IUUC-Ome-081533	Oryza meridionalis	54.47	3.00e-80	291.00
IUUC-Oni-082514	Oryza nivara	56.66	5.00e-115	407.00
IUUC-Opu-083647	Oryza punctata	56.66	2.00e-115	408.00
IUUC-Oru-084956	Oryza rufipogon	54.20	9.00e-82	296.00
IUUC-Osa-085907	Oryza sativa	54.47	6.00e-82	297.00
IUUC-Ppa-095270	Physcomitrella patens	59.31	9.00e-82	296.00
IUUC-Pop-099755	Populus trichocarpa	69.07	2.00e-142	498.00
IUUC-Ppe-102005	Prunus persica	64.39	2.00e-133	468.00
IUUC-Ptt-103787	Puccinia triticina	44.44	2.00e-10	58.90
IUUC-Smo-108799	Selaginella moellendorffii	61.02	7.00e-94	337.00
IUUC-Sit-109918	Setaria italica	57.22	7.00e-109	387.00
IUUC-Sly-111768	Solanum lycopersicum	62.30	2.00e-112	398.00
IUUC-Stu-112684	Solanum tuberosum	62.96	8.00e-111	393.00
IUUC-Sbi-113823	Sorghum bicolor	55.09	3.00e-110	391.00
IUUC-Tca-121104	Theobroma cacao	68.97	1.00e-143	502.00
IUUC-Tae-123033	Triticum aestivum	59.56	3.00e-82	298.00
IUUC-Tur-126522	Triticum urartu	59.56	3.00e-81	295.00
IUUC-Vvi-131601	Vitis vinifera	67.46	1.00e-121	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence