iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016617

Ensembl Protein ID

Bra003542.1-P

UniProt Accession

M4CH59; M4CH59_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003542	Bra003542.1	Bra003542.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-32	111.0	352	392
UBD/Beta-Prp	9.90e-65	219.7	181	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H  +v+c+++    d ++l++GsdD+t kvWD+ t +++++
   Q: 352  HLKGVNCVDYftgGDkPYLITGSDDHTAKVWDYQTKTCVQT 392
           8889****966*9778********************99986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           ++++++++v+ +p +++++++ ++gt+ +w+++t+++++s++  e +v++ kf +++++ v g++D++i+v++++t + + ++++h d++++++++
   Q: 181  QRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMVKSFEVTELPVRSAKFVSRKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVH 276
           6678899***************************************************************************************** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelv 196
           p+  +++s s+d  i++wd+e++++  ++++gh++ v+ v+++p++ n ++s+slDr +++W+l + +   tl   h + v++++     ++++l+
   Q: 277  PTLPYVLSSSDDMLIKLWDWEKDWVCTQIFEGHSHYVMQVTFNPKDtNTFASASLDRSINIWNLGSPDPNFTLDA-HLKGVNCVDyfTGGDKPYLI 371
           ************************9999*********************************************98.*********6444555**** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgse 285
           +gs+d t k+wd+qt++cv+tl ght nv+ v f+p+  ++++gs+Dg++riW  ++  l +tl++  ++v+++ +++ +++v++  +e
   Q: 372  TGSDDHTAKVWDYQTKTCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHMKGSHRVVIGYDE 460
           ****************************************************************************8887877754444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFYGTAVWDP WLIVGQIICL QCSFYLSLGV FMILFLGLRV PRLSLVYFFD YATLTTSTVT 60
GWCVIASFLF TSLAGAVYMI FVVERARKCL DFSATLYIIH LYLCILNGGW PSSMAWWVVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTATG GCACAGCTGT ATGGGACCCT TGGCTTATCG TTGGCCAGAT TATCTGCCTT 60
CAATGCTCCT TCTACCTCTC TCTCGGAGTC TTCATGATCC TCTTCCTTGG CCTTCGCGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR019185--Integral_membrane_SYS1-rel
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF09801--SYS1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	71.44	0.00e+00	1352.00
IUUC-Aly-005643	Arabidopsis lyrata	91.35	0.00e+00	1632.00
IUUC-Ath-007630	Arabidopsis thaliana	91.68	0.00e+00	1659.00
IUUC-Ago-007914	Ashbya gossypii	46.36	0.00e+00	715.00
IUUC-Acl-008237	Aspergillus clavatus	51.97	0.00e+00	897.00
IUUC-Afu-008845	Aspergillus fumigatus	52.36	0.00e+00	883.00
IUUC-Ani-009135	Aspergillus nidulans	52.55	0.00e+00	875.00
IUUC-Aor-009939	Aspergillus oryzae	51.76	0.00e+00	902.00
IUUC-Ate-010355	Aspergillus terreus	52.43	0.00e+00	870.00
IUUC-Bta-013579	Bos taurus	61.76	0.00e+00	967.00
IUUC-Bol-015466	Brassica oleracea	98.79	0.00e+00	1672.00
IUUC-Csa-023383	Chlorocebus sabaeus	64.67	0.00e+00	825.00
IUUC-Cho-024454	Choloepus hoffmanni	58.56	0.00e+00	919.00
IUUC-Cin-025681	Ciona intestinalis	58.16	0.00e+00	999.00
IUUC-Csv-026012	Ciona savignyi	59.00	0.00e+00	970.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	50.00	0.00e+00	801.00
IUUC-Dre-027846	Danio rerio	61.99	0.00e+00	1115.00
IUUC-Dor-030462	Dipodomys ordii	59.16	0.00e+00	854.00
IUUC-Ete-033166	Echinops telfairi	57.78	0.00e+00	698.00
IUUC-Gac-041733	Gasterosteus aculeatus	60.90	0.00e+00	1068.00
IUUC-Kpa-049265	Komagataella pastoris	50.12	0.00e+00	842.00
IUUC-Lma-053218	Leptosphaeria maculans	51.28	0.00e+00	857.00
IUUC-Mor-057264	Magnaporthe oryzae	53.13	0.00e+00	857.00
IUUC-Mpo-057538	Magnaporthe poae	53.07	0.00e+00	877.00
IUUC-Mla-058937	Melampsora laricipopulina	53.09	0.00e+00	886.00
IUUC-Mga-059875	Meleagris gallopavo	61.19	0.00e+00	1110.00
IUUC-Nfi-068277	Neosartorya fischeri	52.05	0.00e+00	875.00
IUUC-Opr-070334	Ochotona princeps	62.50	0.00e+00	1001.00
IUUC-Ont-071563	Oreochromis niloticus	61.62	0.00e+00	1107.00
IUUC-Oin-079211	Oryza indica	81.71	0.00e+00	1456.00
IUUC-Olo-080731	Oryza longistaminata	79.10	0.00e+00	1461.00
IUUC-Ome-081762	Oryza meridionalis	76.89	0.00e+00	1370.00
IUUC-Osa-086026	Oryza sativa	83.80	0.00e+00	1509.00
IUUC-Psi-093308	Pelodiscus sinensis	61.34	0.00e+00	1113.00
IUUC-Pno-094785	Phaeosphaeria nodorum	57.93	3.00e-103	369.00
IUUC-Pfo-096587	Poecilia formosa	61.50	0.00e+00	1108.00
IUUC-Pab-097926	Pongo abelii	59.36	0.00e+00	1035.00
IUUC-Pva-102451	Pteropus vampyrus	58.41	0.00e+00	848.00
IUUC-Pte-104274	Pyrenophora teres	52.56	0.00e+00	890.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	51.84	0.00e+00	840.00
IUUC-Rno-105979	Rattus norvegicus	53.84	0.00e+00	812.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	47.59	0.00e+00	786.00
IUUC-Smo-108695	Selaginella moellendorffii	80.02	0.00e+00	1377.00
IUUC-Sit-110239	Setaria italica	79.93	0.00e+00	1526.00
IUUC-Sar-113472	Sorex araneus	57.03	0.00e+00	763.00
IUUC-Tsy-118824	Tarsius syrichta	57.71	0.00e+00	785.00
IUUC-Tvi-122546	Trichoderma virens	52.96	0.00e+00	866.00
IUUC-Tae-125292	Triticum aestivum	80.92	0.00e+00	1529.00
IUUC-Tur-126283	Triticum urartu	72.30	0.00e+00	1352.00
IUUC-Uma-129351	Ustilago maydis	50.06	0.00e+00	876.00
IUUC-Vda-129716	Verticillium dahliae	53.48	0.00e+00	896.00
IUUC-Vpa-130037	Vicugna pacos	50.41	6.00e-131	461.00
IUUC-Xtr-132633	Xenopus tropicalis	61.21	0.00e+00	1102.00
IUUC-Xma-133347	Xiphophorus maculatus	61.74	0.00e+00	1110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence