iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014644

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000880

Gene Name

LOC100845469; BRADI_1g44390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G44390	BRADI1G44390.1	BRADI1G44390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.60e-31	106.8	41	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrq.plteedlvPnltlrrliqawceens 73
           +p++f+CpIsl+lMrdPv++p+Gitydr+++e wla+g+ tcPvt++ pl+  dlvPn++ rr+iqawc +n+
   Q: 41   IPAHFRCPISLDLMRDPVTAPTGITYDRENLEGWLARGHGTCPVTGRgPLRLADLVPNHATRRMIQAWCVANR 113
           89*******************************************75499*******************9997 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MVLPMSRATR LMPELPLLRR GRRQAITAST SEDHQEEELA IPAHFRCPIS LDLMRDPVTA 60
PTGITYDREN LEGWLARGHG TCPVTGRGPL RLADLVPNHA TRRMIQAWCV ANRARGVERV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCAGCTCC TGCTCCATTC CATTCAAAGT TTCCTCCAGC TGCAACTTGC GACCAACGGC 60
CGACTTCTCT ACTGGAAATG GTTCTACCCA TGTCGAGGGC GACAAGGCTG ATGCCGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100845469

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	39.51	4.00e-72	264.00
IUUC-Ath-007692	Arabidopsis thaliana	38.63	2.00e-70	259.00
IUUC-Bol-016269	Brassica oleracea	40.10	1.00e-74	273.00
IUUC-Bra-017285	Brassica rapa	39.58	2.00e-76	278.00
IUUC-Gma-043233	Glycine max	43.31	4.00e-85	307.00
IUUC-Hvu-047616	Hordeum vulgare	65.95	6.00e-135	473.00
IUUC-Lpe-050701	Leersia perrieri	71.43	3.00e-141	494.00
IUUC-Mtr-057926	Medicago truncatula	41.33	2.00e-86	311.00
IUUC-Mac-065672	Musa acuminata	48.67	4.00e-93	333.00
IUUC-Oba-075080	Oryza barthii	56.37	1.00e-100	359.00
IUUC-Obr-076534	Oryza brachyantha	68.37	4.00e-125	440.00
IUUC-Ogl-077061	Oryza glaberrima	72.55	3.00e-142	497.00
IUUC-Ogu-078268	Oryza glumaepatula	72.81	1.00e-133	469.00
IUUC-Oin-079382	Oryza indica	72.81	8.00e-134	469.00
IUUC-Ome-081665	Oryza meridionalis	68.86	8.00e-128	449.00
IUUC-Oni-082958	Oryza nivara	73.03	3.00e-135	474.00
IUUC-Opu-083563	Oryza punctata	61.10	3.00e-112	397.00
IUUC-Oru-084868	Oryza rufipogon	68.69	7.00e-124	436.00
IUUC-Osa-086217	Oryza sativa	73.04	3.00e-136	477.00
IUUC-Ppa-095941	Physcomitrella patens	37.56	3.00e-64	238.00
IUUC-Pop-099112	Populus trichocarpa	45.77	2.00e-98	352.00
IUUC-Ppe-101406	Prunus persica	44.16	1.00e-101	362.00
IUUC-Smo-108988	Selaginella moellendorffii	37.79	2.00e-61	229.00
IUUC-Sit-109975	Setaria italica	70.07	9.00e-121	426.00
IUUC-Sly-111577	Solanum lycopersicum	44.26	3.00e-105	374.00
IUUC-Stu-112581	Solanum tuberosum	44.76	3.00e-95	341.00
IUUC-Sbi-113869	Sorghum bicolor	70.42	7.00e-104	370.00
IUUC-Tca-121201	Theobroma cacao	45.39	3.00e-100	357.00
IUUC-Tae-124576	Triticum aestivum	77.78	3.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence