iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014245

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100825986; BRADI_1g39017

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G39017	BRADI1G39017.1	BRADI1G39017.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-07	30.6	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +   ++ ++ lp C H+fh  C+ +w         + +CP+Cr
   Q: 110  CAVCLETLrsgET-VRRLPvCAHTFHVGCIGMW------LHSHTTCPVCR 152
           ******9966444.999999*************......99********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPDYAWQVSG VSDAGQSSVF LLALYPVLLL LVILSAFVKY VWIALALYCA LMVLFSCTAR 60
FCALPEPAGS SAVDRGGLSE AGIAAIIPAF AYDAAAASSA AVGDGGQVQC AVCLETLRSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGACT ACGCGTGGCA AGTGAGCGGT GTCTCGGACG CCGGGCAGAG CAGCGTGTTC 60
CTCCTCGCGT TGTACCCTGT GCTCCTGCTC CTCGTCATCC TCTCCGCGTT CGTCAAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100825986

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000183	Aegilops tauschii	51.81	4.00e-31	127.00
IUUC-Hvu-047387	Hordeum vulgare	57.49	5.00e-35	139.00
IUUC-Ogl-077028	Oryza glaberrima	70.00	8.00e-20	89.40
IUUC-Ogu-078270	Oryza glumaepatula	67.92	7.00e-18	82.80
IUUC-Oin-079291	Oryza indica	67.92	7.00e-18	82.80
IUUC-Ome-081332	Oryza meridionalis	50.88	9.00e-19	85.90
IUUC-Opu-083183	Oryza punctata	47.62	1.00e-19	88.60
IUUC-Oru-084821	Oryza rufipogon	67.92	6.00e-18	83.20
IUUC-Osa-085778	Oryza sativa	67.92	1.00e-17	82.40
IUUC-Sit-110059	Setaria italica	50.89	1.00e-25	108.00
IUUC-Sbi-114735	Sorghum bicolor	41.27	2.00e-19	88.20
IUUC-Tae-123186	Triticum aestivum	60.48	4.00e-38	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence